Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC126177.5-201ENST00000549599 178 ntBASIC10.42□□□□□ -0.74
SMARCA2P51531 uc_338.18-201ENST00000615451 175 ntBASIC10.42□□□□□ -0.74
SMARCA2P51531 AC100827.5-201ENST00000615883 426 ntBASIC10.42□□□□□ -0.74
SMARCA2P51531 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SMARCA2P51531 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA2P51531 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SMARCA2P51531 GTF2IP4-201ENST00000453092 2054 ntBASIC10.42□□□□□ -0.74
SMARCA2P51531 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SMARCA2P51531 EEF1A1P30-201ENST00000429708 1315 ntBASIC10.41□□□□□ -0.74
SMARCA2P51531 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SMARCA2P51531 AL645733.1-201ENST00000402250 217 ntBASIC10.41□□□□□ -0.74
SMARCA2P51531 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC10.41□□□□□ -0.74
SMARCA2P51531 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC10.41□□□□□ -0.74
SMARCA2P51531 AC015983.1-201ENST00000441577 373 ntBASIC10.41□□□□□ -0.74
SMARCA2P51531 AZGP1P2-201ENST00000454506 345 ntBASIC10.41□□□□□ -0.74
SMARCA2P51531 LDHBP2-201ENST00000456969 1005 ntBASIC10.41□□□□□ -0.74
SMARCA2P51531 AC072052.1-201ENST00000496556 306 ntBASIC10.41□□□□□ -0.74
SMARCA2P51531 AC093890.1-201ENST00000502554 540 ntBASIC10.41□□□□□ -0.74
SMARCA2P51531 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC10.41□□□□□ -0.74
SMARCA2P51531 AC018809.2-201ENST00000602436 3823 ntBASIC10.41□□□□□ -0.74
SMARCA2P51531 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC10.41□□□□□ -0.74
SMARCA2P51531 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SMARCA2P51531 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
SMARCA2P51531 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SMARCA2P51531 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA2P51531 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMARCA2P51531 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC10.4□□□□□ -0.74
SMARCA2P51531 RNU1-24P-201ENST00000364285 165 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 RNA5SP339-201ENST00000390987 122 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 RNU6ATAC18P-201ENST00000408413 101 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 FAR2P2-201ENST00000413041 594 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC10.4□□□□□ -0.74
SMARCA2P51531 FAR2P4-202ENST00000425399 584 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC10.4□□□□□ -0.74
SMARCA2P51531 VDAC2P4-201ENST00000452925 711 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC10.4□□□□□ -0.74
SMARCA2P51531 AC087672.1-201ENST00000479876 766 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 AC093267.1-201ENST00000489176 961 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 RPEP1-201ENST00000504507 658 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 HSPE1P2-201ENST00000554777 306 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC10.4□□□□□ -0.74
SMARCA2P51531 AC010245.2-201ENST00000606908 1167 ntBASIC10.4□□□□□ -0.74
SMARCA2P51531 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMARCA2P51531 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMARCA2P51531 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SMARCA2P51531 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC10.4□□□□□ -0.74
SMARCA2P51531 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMARCA2P51531 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
SMARCA2P51531 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMARCA2P51531 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SMARCA2P51531 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SMARCA2P51531 MIR765-201ENST00000390226 114 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 AC108075.1-201ENST00000424692 529 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC10.39□□□□□ -0.75
SMARCA2P51531 CYCSP6-201ENST00000434498 302 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC10.39□□□□□ -0.75
SMARCA2P51531 AC099521.1-201ENST00000482557 334 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC10.39□□□□□ -0.75
SMARCA2P51531 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC10.39□□□□□ -0.75
SMARCA2P51531 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC10.39□□□□□ -0.75
SMARCA2P51531 HNRNPCP1-201ENST00000556181 766 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 AC104785.1-201ENST00000603220 588 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMARCA2P51531 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SMARCA2P51531 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SMARCA2P51531 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMARCA2P51531 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
SMARCA2P51531 AC026951.1-201ENST00000559530 2459 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 AC112255.1-201ENST00000624070 2493 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMARCA2P51531 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC10.39□□□□□ -0.75
SMARCA2P51531 AL136531.3-201ENST00000624378 3658 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SMARCA2P51531 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SMARCA2P51531 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SMARCA2P51531 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SMARCA2P51531 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC10.39□□□□□ -0.75
SMARCA2P51531 AC005294.1-201ENST00000355509 281 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC10.39□□□□□ -0.75
SMARCA2P51531 HIGD1AP8-201ENST00000453927 274 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 AC112187.1-201ENST00000455837 479 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 RN7SKP66-201ENST00000516681 231 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC10.39□□□□□ -0.75
SMARCA2P51531 AC063977.5-201ENST00000601044 974 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 AC087763.1-201ENST00000603391 286 ntBASIC10.39□□□□□ -0.75
SMARCA2P51531 PACRG-210ENST00000611387 279 ntTSL 5 BASIC10.39□□□□□ -0.75
SMARCA2P51531 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA2P51531 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SMARCA2P51531 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms