Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CX3CR1P49238 AC011416.1-201ENST00000514947 1732 ntBASIC5.34□□□□□ -1.56
CX3CR1P49238 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.34□□□□□ -1.56
CX3CR1P49238 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
CX3CR1P49238 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CX3CR1P49238 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CX3CR1P49238 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CR1P49238 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CX3CR1P49238 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
CX3CR1P49238 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CX3CR1P49238 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
CX3CR1P49238 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 EIF3EP1-201ENST00000433978 1316 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 KYNUP3-201ENST00000574386 1341 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CX3CR1P49238 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CX3CR1P49238 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC010086.1-201ENST00000437359 1052 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AL162739.1-201ENST00000450606 307 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC099670.1-201ENST00000455141 783 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CR1P49238 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC093719.1-201ENST00000480427 441 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 RPL34P33-201ENST00000486062 334 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC090958.1-201ENST00000511122 351 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.33□□□□□ -1.56
CX3CR1P49238 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC005632.2-201ENST00000564271 828 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC090286.3-201ENST00000573133 187 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.33□□□□□ -1.56
CX3CR1P49238 CCDC58P1-201ENST00000578567 430 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AP001823.1-201ENST00000604056 1003 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AC011891.2-201ENST00000604949 397 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 RPSAP75-201ENST00000605848 301 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC007603.3-201ENST00000636915 979 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
CX3CR1P49238 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC012078.1-201ENST00000405035 1646 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 AC016583.1-201ENST00000624221 2431 ntBASIC5.33□□□□□ -1.56
CX3CR1P49238 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CX3CR1P49238 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CX3CR1P49238 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.32□□□□□ -1.56
CX3CR1P49238 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
CX3CR1P49238 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 LINC01613-201ENST00000561476 2780 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 SNORD1C-201ENST00000363315 78 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CX3CR1P49238 MIR551B-201ENST00000384984 96 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 PSMA6P1-201ENST00000400275 741 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
CX3CR1P49238 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 RNA5SP156-201ENST00000410250 110 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.32□□□□□ -1.56
CX3CR1P49238 AL354868.1-201ENST00000417077 482 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 PSMD10P2-201ENST00000432890 672 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 ARMC4P1-201ENST00000438905 707 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CX3CR1P49238 AC114982.2-201ENST00000461396 358 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 RPS7P10-201ENST00000464254 603 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 H3F3AP5-201ENST00000475267 429 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.32□□□□□ -1.56
CX3CR1P49238 AC097486.1-201ENST00000515331 210 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 SNORA74.1-201ENST00000516320 180 ntBASIC5.32□□□□□ -1.56
CX3CR1P49238 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.32□□□□□ -1.56
CX3CR1P49238 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CX3CR1P49238 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.32□□□□□ -1.56
CX3CR1P49238 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms