Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 KCTD9P1-201ENST00000430462 1167 ntBASIC6.46□□□□□ -1.38
RXRGP48443 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.46□□□□□ -1.38
RXRGP48443 RPL5P7-201ENST00000444235 813 ntBASIC6.46□□□□□ -1.38
RXRGP48443 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 HMGN1P2-201ENST00000445197 310 ntBASIC6.46□□□□□ -1.38
RXRGP48443 COX4I1P2-201ENST00000447446 547 ntBASIC6.46□□□□□ -1.38
RXRGP48443 RN7SL254P-201ENST00000460609 284 ntBASIC6.46□□□□□ -1.38
RXRGP48443 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.46□□□□□ -1.38
RXRGP48443 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 SNORA81.2-201ENST00000516868 170 ntBASIC6.46□□□□□ -1.38
RXRGP48443 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.46□□□□□ -1.38
RXRGP48443 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.46□□□□□ -1.38
RXRGP48443 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.46□□□□□ -1.38
RXRGP48443 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.46□□□□□ -1.38
RXRGP48443 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.46□□□□□ -1.38
RXRGP48443 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.46□□□□□ -1.38
RXRGP48443 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.46□□□□□ -1.38
RXRGP48443 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.46□□□□□ -1.38
RXRGP48443 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.46□□□□□ -1.38
RXRGP48443 AC124916.2-201ENST00000604416 224 ntBASIC6.46□□□□□ -1.38
RXRGP48443 AL356608.1-201ENST00000610034 820 ntBASIC6.46□□□□□ -1.38
RXRGP48443 RN7SL261P-201ENST00000613441 282 ntBASIC6.46□□□□□ -1.38
RXRGP48443 AL445649.1-201ENST00000615941 691 ntBASIC6.46□□□□□ -1.38
RXRGP48443 AL133370.2-201ENST00000619934 439 ntBASIC6.46□□□□□ -1.38
RXRGP48443 AC022400.9-201ENST00000623633 273 ntBASIC6.46□□□□□ -1.38
RXRGP48443 AP000577.1-201ENST00000624366 878 ntBASIC6.46□□□□□ -1.38
RXRGP48443 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RXRGP48443 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
RXRGP48443 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
RXRGP48443 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
RXRGP48443 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RXRGP48443 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.45□□□□□ -1.38
RXRGP48443 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RXRGP48443 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RXRGP48443 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 AC083799.1-201ENST00000366451 910 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRGP48443 AC092642.1-201ENST00000392417 425 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AL139805.1-201ENST00000407837 289 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AL353626.3-201ENST00000413399 657 ntBASIC6.45□□□□□ -1.38
RXRGP48443 NDUFA5P8-201ENST00000449019 346 ntBASIC6.45□□□□□ -1.38
RXRGP48443 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRGP48443 RARRES2P3-201ENST00000457739 473 ntBASIC6.45□□□□□ -1.38
RXRGP48443 RPL19P11-201ENST00000495944 589 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AC090568.1-201ENST00000509499 856 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AC108103.1-201ENST00000511286 446 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AC008429.2-201ENST00000523057 864 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AL133399.1-201ENST00000527476 298 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AP000662.1-201ENST00000530952 487 ntBASIC6.45□□□□□ -1.38
RXRGP48443 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRGP48443 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRGP48443 AL162632.2-201ENST00000553933 399 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.45□□□□□ -1.38
RXRGP48443 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.45□□□□□ -1.38
RXRGP48443 AC005632.2-201ENST00000564271 828 ntBASIC6.45□□□□□ -1.38
RXRGP48443 LINC00556-201ENST00000569603 412 ntBASIC6.45□□□□□ -1.38
RXRGP48443 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRGP48443 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRGP48443 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.45□□□□□ -1.38
RXRGP48443 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.45□□□□□ -1.38
RXRGP48443 AL049840.5-201ENST00000602827 552 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AL133406.3-201ENST00000606817 541 ntBASIC6.45□□□□□ -1.38
RXRGP48443 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.45□□□□□ -1.38
RXRGP48443 MIR6811-201ENST00000620409 58 ntBASIC6.45□□□□□ -1.38
RXRGP48443 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 HSPD1P7-201ENST00000447985 1686 ntBASIC6.45□□□□□ -1.38
RXRGP48443 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
RXRGP48443 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.45□□□□□ -1.38
RXRGP48443 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
RXRGP48443 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RXRGP48443 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRGP48443 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RXRGP48443 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRGP48443 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRGP48443 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RXRGP48443 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
RXRGP48443 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RXRGP48443 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms