Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 RN7SL230P-201ENST00000580835 303 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC063977.7-201ENST00000594454 337 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC091133.5-201ENST00000603088 301 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC027334.1-201ENST00000603257 310 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 QTRT1P1-201ENST00000604344 1078 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 RN7SL261P-201ENST00000613441 282 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC048344.4-201ENST00000619744 527 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AL035425.4-201ENST00000624509 1063 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDHB1Q9Y5F3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDHB1Q9Y5F3 PARP4P1-201ENST00000435945 2337 ntBASIC6.59□□□□□ -1.36
PCDHB1Q9Y5F3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PCDHB1Q9Y5F3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDHB1Q9Y5F3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC122713.2-201ENST00000624942 3335 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 RNU1-46P-201ENST00000384425 164 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 VIM2P-201ENST00000402383 1294 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AL359694.1-201ENST00000403247 604 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 Z86062.1-201ENST00000406773 777 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 RN7SKP129-201ENST00000410288 299 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 RNA5SP431-201ENST00000410312 120 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC106883.1-201ENST00000418805 562 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AL139415.1-201ENST00000424862 352 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC021006.1-201ENST00000489849 553 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 HMGB1P3-201ENST00000502802 616 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC112484.3-201ENST00000505910 329 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC018797.1-201ENST00000510791 255 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC093664.1-201ENST00000511779 289 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC067904.2-201ENST00000517322 1283 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AP003355.1-201ENST00000518956 587 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 TDGP1-201ENST00000543961 1229 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC093014.1-201ENST00000548926 724 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AL049840.5-201ENST00000602827 552 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AL356986.1-201ENST00000604085 341 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC013244.3-201ENST00000605614 388 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC012213.4-201ENST00000606457 354 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 MIR8084-201ENST00000614105 89 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC005277.2-201ENST00000617898 390 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 MIR7854-201ENST00000620068 65 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC073342.3-201ENST00000624211 193 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC061999.1-201ENST00000624454 177 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC107980.1-201ENST00000558671 3355 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 CASC19-228ENST00000641414 1684 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 IFIT1P1-201ENST00000400497 1449 ntBASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB1Q9Y5F3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms