Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 RNU6-216P-201ENST00000363282 104 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 RN7SKP204-201ENST00000365481 310 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC245036.1-201ENST00000391727 309 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AL109755.1-201ENST00000401791 649 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 RNU4-14P-201ENST00000410858 122 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC096644.2-201ENST00000429278 159 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 NPM1P51-201ENST00000443470 744 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 FAR2P3-205ENST00000447059 604 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 PGA5-202ENST00000451616 971 ntTSL 2 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 MED28P7-201ENST00000456611 530 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC025062.1-201ENST00000465163 644 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 RPSAP48-201ENST00000466509 889 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC010307.1-201ENST00000467206 836 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 RN7SL659P-201ENST00000483093 299 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 RPL22-207ENST00000484532 449 ntTSL 2 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 HSPD1P18-201ENST00000504252 244 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 HMGB1P28-201ENST00000507778 552 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC079140.5-201ENST00000507882 310 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 GLTPP1-201ENST00000528859 622 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 RAN-211ENST00000541679 572 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AC062037.2-201ENST00000610137 73 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 AP000590.1-201ENST00000624943 464 ntBASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
PCDHB13Q9Y5F0 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 AC008627.1-201ENST00000517511 1704 ntBASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PCDHB13Q9Y5F0 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 AL157831.2-201ENST00000564681 3095 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 OR7E122P-202ENST00000641144 6171 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 RNU6-1066P-201ENST00000363573 105 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 KRTAP9-1-201ENST00000398470 753 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 AL049697.2-201ENST00000403708 294 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 HSPE1P1-201ENST00000421494 318 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 RPL36P2-201ENST00000426026 315 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 AL160004.2-201ENST00000432935 350 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 RBMY2OP-201ENST00000447105 810 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 TSSK1A-201ENST00000450724 768 ntBASIC9.64□□□□□ -0.87
PCDHB13Q9Y5F0 HMGB3P22-202ENST00000451823 572 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms