Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 HSPD1P8-201ENST00000400121 1658 ntBASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC5.39□□□□□ -1.55
KIAA1549Q9HCM3 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 PTCD2P2-201ENST00000415579 1095 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 SUMO2P3-201ENST00000438311 288 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 TRIM60P16-201ENST00000444048 694 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AP006222.1-205ENST00000450734 457 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC004129.2-201ENST00000457229 287 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC011476.1-201ENST00000466725 307 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 RN7SL174P-201ENST00000475578 289 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 NENFP3-201ENST00000503735 313 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 GAPDHP71-201ENST00000511530 1003 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC253576.1-201ENST00000511645 1156 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC005225.5-201ENST00000623547 2225 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC073365.1-203ENST00000641055 1992 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 RN7SKP229-201ENST00000410465 302 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AL162739.1-201ENST00000450606 307 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 RPL7L1P4-201ENST00000513004 707 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC027544.3-201ENST00000535082 757 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 DPPA3P2-201ENST00000553589 478 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC020978.7-201ENST00000575953 1187 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AC079414.3-201ENST00000612986 1090 ntBASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.38□□□□□ -1.55
KIAA1549Q9HCM3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AL117378.2-201ENST00000622916 1337 ntBASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AC016027.5-201ENST00000427227 210 ntBASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AP003396.4-201ENST00000527574 265 ntBASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AC006530.1-201ENST00000555980 571 ntBASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AC007448.1-201ENST00000582714 234 ntBASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AC119403.2-201ENST00000590960 598 ntBASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 AC005725.1-201ENST00000577346 2607 ntBASIC5.37□□□□□ -1.55
KIAA1549Q9HCM3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 AC096775.1-201ENST00000437724 448 ntBASIC5.36□□□□□ -1.55
KIAA1549Q9HCM3 OR2AF1P-201ENST00000454899 889 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms