Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AL022331.1-201ENST00000429025 477 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AC104164.1-201ENST00000460282 590 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AC073594.1-201ENST00000462065 364 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AC024558.1-201ENST00000505008 528 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AL445222.1-201ENST00000607259 628 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 AC024255.1-201ENST00000614376 102 ntBASIC9.02□□□□□ -0.97
SCAPERQ9BY12 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SCAPERQ9BY12 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 YES1P1-201ENST00000418510 1628 ntBASIC9.01□□□□□ -0.97
SCAPERQ9BY12 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 ZNF812P-201ENST00000457674 1694 ntBASIC9.01□□□□□ -0.97
SCAPERQ9BY12 CASC19-248ENST00000641674 1356 ntBASIC9.01□□□□□ -0.97
SCAPERQ9BY12 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 AL139148.1-201ENST00000427122 680 ntBASIC9.01□□□□□ -0.97
SCAPERQ9BY12 RN7SL30P-201ENST00000488416 306 ntBASIC9.01□□□□□ -0.97
SCAPERQ9BY12 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 AC119403.2-201ENST00000590960 598 ntBASIC9.01□□□□□ -0.97
SCAPERQ9BY12 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 METTL15-211ENST00000634762 718 ntTSL 5 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCAPERQ9BY12 AP003175.1-201ENST00000641383 6658 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SCAPERQ9BY12 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC9□□□□□ -0.97
SCAPERQ9BY12 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 AC103591.2-201ENST00000265259 766 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9□□□□□ -0.97
SCAPERQ9BY12 RN7SKP273-201ENST00000411392 314 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC9□□□□□ -0.97
SCAPERQ9BY12 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC9□□□□□ -0.97
SCAPERQ9BY12 MRPS16P1-201ENST00000523462 412 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 HAUS8P1-201ENST00000549005 542 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC9□□□□□ -0.97
SCAPERQ9BY12 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC9□□□□□ -0.97
SCAPERQ9BY12 AC020765.1-201ENST00000604296 328 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 AL512329.2-201ENST00000607350 548 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 AC008115.3-201ENST00000614874 549 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 AL445647.2-201ENST00000615170 130 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 AC087269.2-201ENST00000641764 975 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC9□□□□□ -0.97
SCAPERQ9BY12 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9□□□□□ -0.97
SCAPERQ9BY12 AL161756.3-201ENST00000641216 2071 ntBASIC9□□□□□ -0.97
SCAPERQ9BY12 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC9□□□□□ -0.97
SCAPERQ9BY12 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
SCAPERQ9BY12 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 RNA5SP183-201ENST00000362452 119 ntBASIC8.99□□□□□ -0.97
SCAPERQ9BY12 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 RN7SKP125-201ENST00000410481 302 ntBASIC8.99□□□□□ -0.97
SCAPERQ9BY12 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 RANP1-206ENST00000455094 651 ntBASIC8.99□□□□□ -0.97
SCAPERQ9BY12 RN7SL808P-201ENST00000496066 299 ntBASIC8.99□□□□□ -0.97
SCAPERQ9BY12 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms