Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AP000926.4-201ENST00000527351 454 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC009729.1-201ENST00000548873 1133 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC005726.4-201ENST00000582858 458 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 CCDC58P3-201ENST00000590792 430 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC108673.3-201ENST00000609183 335 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC068726.1-201ENST00000610993 341 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC090246.1-201ENST00000616499 426 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC131159.1-201ENST00000621854 213 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC022400.9-201ENST00000623633 273 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC084035.1-201ENST00000634543 607 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 CDY7P-201ENST00000429883 1604 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AL512329.1-201ENST00000404600 1592 ntBASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNGAP1Q96PV0 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
SYNGAP1Q96PV0 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.16
SYNGAP1Q96PV0 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
SYNGAP1Q96PV0 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC010132.4-201ENST00000569883 1368 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 RN7SKP28-201ENST00000364770 305 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 RNA5SP172-201ENST00000365061 118 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 RNA5SP85-201ENST00000365378 119 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 VIM2P-201ENST00000402383 1294 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 NPM1P25-201ENST00000429734 854 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 RPS10P21-201ENST00000430654 475 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AL353706.1-201ENST00000436728 494 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 GAPDHP37-201ENST00000442317 968 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 GAPDHP20-201ENST00000444107 1007 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 MTND2P19-201ENST00000449129 1012 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 SUMO2P10-201ENST00000452006 288 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 PTGES3P5-201ENST00000455109 434 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 RPL31P3-201ENST00000458430 332 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 SETP6-201ENST00000479329 568 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC113420.1-201ENST00000507903 571 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 CYB5AP5-201ENST00000549779 389 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 DUXAP6-201ENST00000553858 601 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC051619.2-201ENST00000559063 397 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC079315.1-201ENST00000602952 623 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC004492.1-201ENST00000607036 742 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 VIS1.1-201ENST00000610517 203 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 PART1_2.1-201ENST00000612397 250 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC007786.3-201ENST00000615154 596 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 AC093875.1-201ENST00000623688 504 ntBASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SYNGAP1Q96PV0 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms