Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AL034546.1-201ENST00000623740 3693 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 SNORA70H-201ENST00000383910 135 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 SNORA70J-201ENST00000384182 135 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 YWHAZP4-201ENST00000392459 708 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 RPL7AP51-201ENST00000422016 760 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 RPL7AP14-201ENST00000424041 802 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LINC00328-2P-201ENST00000436585 219 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC096632.2-201ENST00000438139 1239 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 EMC3-AS1-205ENST00000438698 534 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 MTCYBP14-201ENST00000457471 715 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 RN7SL643P-201ENST00000471845 291 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC098818.1-201ENST00000478593 252 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC116917.1-201ENST00000520558 305 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 IGHV4-55-201ENST00000520889 368 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AP005639.1-201ENST00000526939 192 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC138207.8-204ENST00000579588 527 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC233702.7-202ENST00000582941 211 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC011500.1-201ENST00000601963 469 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC073046.2-201ENST00000604756 527 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AL159169.2-201ENST00000610061 1269 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AC012676.3-201ENST00000614983 479 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 MIR6811-201ENST00000620409 58 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AL122023.1-201ENST00000622847 530 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 AL591135.1-201ENST00000401578 5914 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 RNU6-697P-201ENST00000363348 107 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 RN7SKP161-201ENST00000411110 305 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 OR5W1P-201ENST00000423705 938 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 OR13K1P-201ENST00000444577 975 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 POU5F1P5-201ENST00000445059 658 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 COX4I1P2-201ENST00000447446 547 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 GM2AP2-201ENST00000491764 562 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 RPS27P20-201ENST00000492051 246 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 MORF4L2P1-201ENST00000503761 858 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 CCNHP1-201ENST00000513311 678 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 SNORD39.2-201ENST00000579995 76 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 RN7SL230P-201ENST00000580835 303 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 AP001885.1-201ENST00000621658 558 ntBASIC5.88□□□□□ -1.47
NUP54Q7Z3B4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms