Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.47□□□□□ -1.21
SOX4Q06945 CHEK2P2-201ENST00000554701 672 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC090695.1-201ENST00000561269 1222 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC007346.1-201ENST00000569208 867 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 MTCO3P24-201ENST00000572729 782 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 CBX3P2-202ENST00000583365 535 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 RSL24D1P11-201ENST00000591045 491 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 BUB1P1-201ENST00000603541 607 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC010738.1-201ENST00000604970 987 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 MIR6885-201ENST00000612241 66 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC122133.1-201ENST00000613964 233 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC005858.3-201ENST00000624756 589 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX4Q06945 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SOX4Q06945 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 HCG18-244ENST00000602516 2890 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SOX4Q06945 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX4Q06945 AC004023.1-201ENST00000561473 1744 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 FO082842.1-201ENST00000423552 1370 ntBASIC7.46□□□□□ -1.21
SOX4Q06945 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
SOX4Q06945 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SOX4Q06945 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.46□□□□□ -1.21
SOX4Q06945 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.46□□□□□ -1.21
SOX4Q06945 AC009948.3-201ENST00000603415 1798 ntBASIC7.46□□□□□ -1.21
SOX4Q06945 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.46□□□□□ -1.21
SOX4Q06945 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.46□□□□□ -1.21
SOX4Q06945 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SOX4Q06945 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
SOX4Q06945 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SOX4Q06945 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.46□□□□□ -1.21
SOX4Q06945 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 FAM133CP-201ENST00000332869 704 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SOX4Q06945 RN7SKP189-201ENST00000365042 330 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 RN7SKP232-201ENST00000410170 290 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AL390774.1-201ENST00000411924 246 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC105402.1-201ENST00000413336 545 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AL158825.1-201ENST00000414735 521 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 RPL12P43-201ENST00000420608 499 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.46□□□□□ -1.22
SOX4Q06945 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 NAP1L4P2-201ENST00000425958 899 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AL593851.1-201ENST00000426171 157 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 NANOGP2-201ENST00000435391 727 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.46□□□□□ -1.22
SOX4Q06945 AC083806.1-201ENST00000468934 316 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 RN7SL390P-201ENST00000470634 284 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX4Q06945 RPS3AP49-201ENST00000472161 790 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 RN7SL612P-201ENST00000497704 295 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC093890.1-201ENST00000502554 540 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 AC010424.1-201ENST00000506336 297 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.46□□□□□ -1.22
SOX4Q06945 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SOX4Q06945 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX4Q06945 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 PTTG3P-201ENST00000521862 606 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX4Q06945 NDUFS5P6-201ENST00000529136 295 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SOX4Q06945 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX4Q06945 AC087897.1-201ENST00000550134 156 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AC103968.1-201ENST00000557841 573 ntBASIC7.46□□□□□ -1.22
SOX4Q06945 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms