Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.52□□□□□ -1.85
HSPG2P98160 RN7SKP227-201ENST00000364445 330 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.52□□□□□ -1.85
HSPG2P98160 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.52□□□□□ -1.85
HSPG2P98160 AL513533.1-201ENST00000453728 415 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 MIR4429-201ENST00000580105 73 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 AL353795.3-201ENST00000624351 5702 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HSPG2P98160 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HSPG2P98160 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC3.52□□□□□ -1.85
HSPG2P98160 DSTNP5-201ENST00000427921 523 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 BX119917.1-201ENST00000432517 502 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 AC095057.1-201ENST00000507583 168 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 AC078899.1-201ENST00000521432 1185 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 uc_338.26-201ENST00000612659 160 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC3.52□□□□□ -1.85
HSPG2P98160 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 AL133243.4-201ENST00000623116 3109 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 AC110048.2-201ENST00000617013 6721 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 AC091046.3-201ENST00000631455 1574 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 RNA5SP478-201ENST00000364657 115 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 RNU4ATAC2P-201ENST00000408674 126 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC3.51□□□□□ -1.85
HSPG2P98160 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC3.51□□□□□ -1.85
HSPG2P98160 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HSPG2P98160 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 ABCA11P-202ENST00000504019 2110 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC105235.1-201ENST00000623208 1816 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HSPG2P98160 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 OR6D1P-201ENST00000436165 939 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC091180.1-201ENST00000462104 372 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC3.51□□□□□ -1.85
HSPG2P98160 AP002981.1-201ENST00000517692 975 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 BLZF2P-201ENST00000553776 1130 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC3.51□□□□□ -1.85
HSPG2P98160 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.51□□□□□ -1.85
HSPG2P98160 AL627230.1-201ENST00000613077 211 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AL591926.8-201ENST00000616876 211 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 WBP1LP8-201ENST00000617401 327 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC3.51□□□□□ -1.85
HSPG2P98160 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.51□□□□□ -1.85
HSPG2P98160 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 AC096921.2-201ENST00000561507 1916 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 SAMM50P1-201ENST00000455403 1399 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC3.51□□□□□ -1.85
HSPG2P98160 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HSPG2P98160 AF131215.2-201ENST00000531549 1710 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 RPS6P23-201ENST00000413224 722 ntBASIC3.51□□□□□ -1.85
HSPG2P98160 CYCSP42-201ENST00000450823 238 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms