Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
USP11P51784 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.77□□□□□ -1.17
USP11P51784 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.77□□□□□ -1.17
USP11P51784 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 AC005839.1-201ENST00000624148 3213 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC061975.7-201ENST00000592016 2692 ntBASIC7.76□□□□□ -1.17
USP11P51784 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
USP11P51784 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.76□□□□□ -1.17
USP11P51784 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
USP11P51784 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
USP11P51784 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.76□□□□□ -1.17
USP11P51784 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 AP003175.1-201ENST00000641383 6658 ntBASIC7.76□□□□□ -1.17
USP11P51784 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
USP11P51784 RN7SKP191-201ENST00000364713 306 ntBASIC7.76□□□□□ -1.17
USP11P51784 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.76□□□□□ -1.17
USP11P51784 NUDT19P3-201ENST00000404698 555 ntBASIC7.76□□□□□ -1.17
USP11P51784 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
USP11P51784 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.76□□□□□ -1.17
USP11P51784 HMGB1P49-201ENST00000418882 569 ntBASIC7.76□□□□□ -1.17
USP11P51784 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.76□□□□□ -1.17
USP11P51784 ARL2BPP3-201ENST00000421226 480 ntBASIC7.76□□□□□ -1.17
USP11P51784 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.76□□□□□ -1.17
USP11P51784 MTCYBP5-201ENST00000423752 1135 ntBASIC7.76□□□□□ -1.17
USP11P51784 DPPA2P1-201ENST00000428060 556 ntBASIC7.76□□□□□ -1.17
USP11P51784 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC7.76□□□□□ -1.17
USP11P51784 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC7.76□□□□□ -1.17
USP11P51784 FABP5P3-201ENST00000437960 408 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.76□□□□□ -1.17
USP11P51784 RPS27AP8-201ENST00000452665 445 ntBASIC7.76□□□□□ -1.17
USP11P51784 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC7.76□□□□□ -1.17
USP11P51784 AC008379.1-201ENST00000463655 464 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.76□□□□□ -1.17
USP11P51784 RN7SL655P-201ENST00000486087 298 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC090543.1-201ENST00000492168 485 ntBASIC7.76□□□□□ -1.17
USP11P51784 RN7SL187P-201ENST00000495587 303 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC7.76□□□□□ -1.17
USP11P51784 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.76□□□□□ -1.17
USP11P51784 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.76□□□□□ -1.17
USP11P51784 SUMO2P19-201ENST00000518920 295 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.76□□□□□ -1.17
USP11P51784 AC093014.1-201ENST00000548926 724 ntBASIC7.76□□□□□ -1.17
USP11P51784 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 AC010287.1-201ENST00000566916 357 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC025283.1-201ENST00000572039 734 ntBASIC7.76□□□□□ -1.17
USP11P51784 DPRXP4-201ENST00000578053 568 ntBASIC7.76□□□□□ -1.17
USP11P51784 AL590032.1-201ENST00000604920 252 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC105129.3-201ENST00000605455 485 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC091768.1-201ENST00000609258 930 ntBASIC7.76□□□□□ -1.17
USP11P51784 VIS1.1-201ENST00000610517 203 ntBASIC7.76□□□□□ -1.17
USP11P51784 AL035661.1-201ENST00000620459 1144 ntBASIC7.76□□□□□ -1.17
USP11P51784 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.76□□□□□ -1.17
USP11P51784 AC025287.2-201ENST00000621911 668 ntBASIC7.76□□□□□ -1.17
USP11P51784 AL359715.5-201ENST00000623431 443 ntBASIC7.76□□□□□ -1.17
USP11P51784 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 AC012213.2-201ENST00000562917 4597 ntBASIC7.76□□□□□ -1.17
USP11P51784 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.76□□□□□ -1.17
USP11P51784 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.76□□□□□ -1.17
USP11P51784 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 ZNF736P9Y-201ENST00000439586 1345 ntBASIC7.76□□□□□ -1.17
USP11P51784 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
USP11P51784 MTND5P29-201ENST00000458676 1807 ntBASIC7.75□□□□□ -1.17
USP11P51784 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USP11P51784 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USP11P51784 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USP11P51784 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
USP11P51784 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.75□□□□□ -1.17
USP11P51784 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USP11P51784 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USP11P51784 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.75□□□□□ -1.17
USP11P51784 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USP11P51784 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
USP11P51784 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USP11P51784 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.75□□□□□ -1.17
USP11P51784 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
USP11P51784 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC7.75□□□□□ -1.17
USP11P51784 RNA5SP474-201ENST00000391234 90 ntBASIC7.75□□□□□ -1.17
USP11P51784 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.75□□□□□ -1.17
USP11P51784 RNU4-22P-201ENST00000411058 166 ntBASIC7.75□□□□□ -1.17
USP11P51784 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.75□□□□□ -1.17
USP11P51784 AL672212.1-201ENST00000422246 400 ntBASIC7.75□□□□□ -1.17
USP11P51784 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms