Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC026826.3-201ENST00000561747 158 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 MTATP6P3-201ENST00000581686 676 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC124856.1-201ENST00000600819 896 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC004908.1-201ENST00000606572 541 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC015982.1-201ENST00000608113 465 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AC093673.2-201ENST00000609674 331 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AL354702.2-202ENST00000641481 890 ntBASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 XIST-206ENST00000434839 2865 ntTSL 5 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CSB-PGBD3P0DP91 MTHFD1P1-201ENST00000413059 2764 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC104446.1-201ENST00000613728 1321 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 RNA5SP474-201ENST00000391234 90 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 RN7SKP240-201ENST00000410583 375 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 GAPDHP57-201ENST00000424400 585 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC016772.1-201ENST00000444170 1261 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 HSFY3P-201ENST00000444242 1191 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 RPL6P5-201ENST00000445678 828 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC073387.1-201ENST00000453261 709 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC018638.3-201ENST00000461273 132 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 TPT1P3-201ENST00000492841 512 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC010374.1-201ENST00000503762 1237 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC021087.2-201ENST00000504656 1203 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC008549.1-201ENST00000512900 643 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 OR52K3P-201ENST00000531655 943 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 EEF1A1P17-201ENST00000547505 1275 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC005771.1-201ENST00000585581 349 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC016727.1-205ENST00000605437 569 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC019226.1-201ENST00000625666 515 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AP001052.1-201ENST00000626421 99 ntBASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CSB-PGBD3P0DP91 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms