Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC011815.3-201ENST00000624194 473 ntBASIC8.52□□□□□ -1.05
HOXA2O43364 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.52□□□□□ -1.05
HOXA2O43364 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.52□□□□□ -1.05
HOXA2O43364 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HOXA2O43364 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXA2O43364 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HOXA2O43364 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC8.52□□□□□ -1.05
HOXA2O43364 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.52□□□□□ -1.05
HOXA2O43364 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.52□□□□□ -1.05
HOXA2O43364 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXA2O43364 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
HOXA2O43364 IFIT1P1-201ENST00000400497 1449 ntBASIC8.52□□□□□ -1.05
HOXA2O43364 AC114786.1-201ENST00000512892 1415 ntBASIC8.52□□□□□ -1.05
HOXA2O43364 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
HOXA2O43364 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.52□□□□□ -1.05
HOXA2O43364 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXA2O43364 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
HOXA2O43364 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXA2O43364 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXA2O43364 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXA2O43364 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.52□□□□□ -1.05
HOXA2O43364 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
HOXA2O43364 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
HOXA2O43364 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 AC090229.1-201ENST00000590983 1609 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXA2O43364 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 RPL11P4-201ENST00000332269 436 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 Y_RNA.295-201ENST00000364918 102 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.51□□□□□ -1.05
HOXA2O43364 RPSAP44-201ENST00000406712 884 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 RPL31P54-201ENST00000429803 370 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.51□□□□□ -1.05
HOXA2O43364 GCNT1P5-201ENST00000449274 682 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC8.51□□□□□ -1.05
HOXA2O43364 VDAC2P4-201ENST00000452925 711 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXA2O43364 RN7SL19P-201ENST00000462522 306 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC018475.1-201ENST00000478358 465 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 RPL7P42-201ENST00000481005 679 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 GAPDHP39-201ENST00000481866 979 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 RNU6-1225P-201ENST00000516336 65 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 RNA5SP75-201ENST00000516841 111 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
HOXA2O43364 AC008802.1-201ENST00000519121 791 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXA2O43364 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC8.51□□□□□ -1.05
HOXA2O43364 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.51□□□□□ -1.05
HOXA2O43364 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXA2O43364 CHCHD3P2-201ENST00000550751 639 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 PSMB7P1-201ENST00000556349 514 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.51□□□□□ -1.05
HOXA2O43364 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.51□□□□□ -1.05
HOXA2O43364 NIFKP8-201ENST00000560500 874 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 MIR3680-2-201ENST00000578247 87 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 MIR3680-1-201ENST00000581433 87 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 RN7SL697P-201ENST00000582484 299 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.51□□□□□ -1.05
HOXA2O43364 AL031429.2-201ENST00000602605 649 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC233280.2-201ENST00000603917 1070 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC008277.2-201ENST00000605196 797 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC087623.4-201ENST00000606593 695 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC024560.3-201ENST00000608482 349 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC090574.1-201ENST00000623186 233 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 AC110769.3-201ENST00000624567 1173 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 AC112487.2-201ENST00000637950 304 ntBASIC8.51□□□□□ -1.05
HOXA2O43364 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
HOXA2O43364 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXA2O43364 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXA2O43364 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXA2O43364 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
HOXA2O43364 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXA2O43364 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms