Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC024224.1-201ENST00000538284 609 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC009729.1-201ENST00000548873 1133 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 LINC00555-201ENST00000569288 442 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC138915.2-201ENST00000569776 97 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 MIR544B-201ENST00000582372 78 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 MIR4314-201ENST00000583321 92 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 SRP68P1-201ENST00000584247 269 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 TPMTP1-201ENST00000592307 737 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC010719.1-201ENST00000602992 747 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC011416.3-201ENST00000603971 355 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AL356052.1-201ENST00000605764 376 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AL121782.1-201ENST00000611242 413 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 MIR6892-201ENST00000612346 115 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 MIR6731-201ENST00000614863 72 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 LINC00561-201ENST00000565815 2738 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC139495.3-201ENST00000515156 4437 ntBASIC8.47□□□□□ -1.05
LHX6Q9UPM6 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC005176.1-201ENST00000594263 1831 ntTSL 2 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 AC105105.1-201ENST00000591360 2553 ntTSL 2 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LHX6Q9UPM6 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 HCRTR2-202ENST00000615358 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 ZNF812P-201ENST00000457674 1694 ntBASIC8.46□□□□□ -1.05
LHX6Q9UPM6 KCNE1-208ENST00000611936 3222 ntAPPRIS P1 TSL 4 BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 AC079777.1-201ENST00000623836 1953 ntBASIC8.46□□□□□ -1.05
LHX6Q9UPM6 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 MTND5P19-201ENST00000424872 1794 ntBASIC8.46□□□□□ -1.05
LHX6Q9UPM6 PPP1R10P1-201ENST00000531876 1795 ntBASIC8.46□□□□□ -1.05
LHX6Q9UPM6 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC8.46□□□□□ -1.05
LHX6Q9UPM6 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RNU6-1066P-201ENST00000363573 105 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RNA5SP161-201ENST00000363871 115 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RNU4-59P-201ENST00000364447 116 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 PSG5-205ENST00000404580 2145 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AP001324.1-201ENST00000428553 399 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RPL34P6-201ENST00000432390 345 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 NRBF2P3-201ENST00000432731 865 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 ACTBP12-201ENST00000435871 418 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 HMGB1P12-201ENST00000438594 598 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC019185.3-201ENST00000438805 323 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RFTN1P1-201ENST00000442584 1033 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AL136380.1-201ENST00000447970 162 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RPL12P25-201ENST00000455592 494 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC114744.1-201ENST00000498116 666 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC104109.1-201ENST00000498563 436 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 RPL29P22-201ENST00000498718 459 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 GZMAP1-201ENST00000503054 631 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC109811.2-201ENST00000509609 452 ntBASIC8.46□□□□□ -1.06
LHX6Q9UPM6 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC8.46□□□□□ -1.06
LHX6Q9UPM6 TDGF1P5-201ENST00000523009 453 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms