Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC02078-201ENST00000592718 4237 ntTSL 2 BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 MORC1-201ENST00000232603 3764 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 MET-201ENST00000318493 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 ILK-215ENST00000537806 1801 ntTSL 5 BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC00886-201ENST00000472943 3306 ntTSL 2 BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 AC048380.2-201ENST00000624725 3548 ntBASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 EPM2A-217ENST00000639423 2886 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KRTAP3-3Q9BYR6 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 KCNAB2-204ENST00000378083 4142 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 MED7-201ENST00000286317 2402 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 CD300LF-203ENST00000343125 1554 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 TNPO1-213ENST00000523768 2632 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 ARHGAP6-205ENST00000380736 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 CFAP97-202ENST00000458385 4852 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 PACSIN1-202ENST00000374043 4229 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 KCNMA1-246ENST00000638848 4423 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 ERI3-202ENST00000372259 1332 ntTSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 GSDMB-212ENST00000520542 1546 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 FAM153B-201ENST00000253490 1913 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 FAM153A-223ENST00000614127 1912 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC005224.3-201ENST00000584683 2140 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 KIAA0907-203ENST00000368321 2947 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 PHF21B-212ENST00000629843 3491 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 GABRA5-201ENST00000335625 3251 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC00562-201ENST00000566385 2470 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 LRRC2-AS1-201ENST00000599511 2291 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 SLC36A2-204ENST00000521967 1471 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 U73169.1-201ENST00000395152 367 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC007249.1-201ENST00000404616 494 ntTSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 U3.40-201ENST00000408706 208 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 SLC6A1-AS1-201ENST00000414969 584 ntTSL 4 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC007679.3-201ENST00000434035 414 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC026202.1-201ENST00000443087 585 ntTSL 4 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC144530.1-201ENST00000452862 555 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 DLEU1-206ENST00000463474 1048 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 RN7SL149P-201ENST00000465197 281 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 RPL34P22-201ENST00000468193 318 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC099328.1-201ENST00000498809 1030 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC016924.1-201ENST00000511512 501 ntTSL 3 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 RNU6-143P-201ENST00000516942 93 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 PGAM1P8-201ENST00000526979 453 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 RBP5-202ENST00000542370 564 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 ASIP-202ENST00000568305 610 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 MIR5009-201ENST00000578736 100 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AL365214.3-204ENST00000587816 894 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 ZNF233-203ENST00000589522 1120 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 RPS5-204ENST00000598098 536 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC025946.2-201ENST00000603398 234 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 RMST_8.1-201ENST00000610287 165 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 HMGB1P24-201ENST00000611897 328 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC010385.3-201ENST00000614250 162 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AL157371.2-201ENST00000637813 480 ntTSL 4 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 ACTR8-201ENST00000335754 3629 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 AC097461.1-201ENST00000568928 2821 ntBASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 PTGES3L-AARSD1-203ENST00000409399 2042 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 CLPB-203ENST00000437826 3379 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 SERPINA10-203ENST00000554173 2000 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 PDXDC1-202ENST00000396410 4521 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP3-3Q9BYR6 TMEM255A-204ENST00000440464 3172 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms