Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC068522.1-201ENST00000482895 345 ntBASIC8.16□□□□□ -1.1
XRN1Q8IZH2 RN7SL30P-201ENST00000488416 306 ntBASIC8.16□□□□□ -1.1
XRN1Q8IZH2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 AC139365.2-201ENST00000517972 253 ntBASIC8.16□□□□□ -1.1
XRN1Q8IZH2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 AC104581.5-201ENST00000624171 7141 ntBASIC8.16□□□□□ -1.1
XRN1Q8IZH2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
XRN1Q8IZH2 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 RNA5SP339-201ENST00000390987 122 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 OR52B5P-201ENST00000435337 951 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 AC006335.2-201ENST00000437993 330 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 AC103563.5-201ENST00000455643 364 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 RPS4XP1-201ENST00000482189 787 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 EIF1P7-201ENST00000487533 337 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 CDH12P4-201ENST00000517835 295 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 CDH12P3-201ENST00000517935 295 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 CDH12P1-201ENST00000518435 295 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 OR52B5P-202ENST00000641118 1110 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 AL355377.1-201ENST00000621125 1653 ntBASIC8.15□□□□□ -1.1
XRN1Q8IZH2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
XRN1Q8IZH2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 AC005042.1-201ENST00000393397 800 ntBASIC8.15□□□□□ -1.11
XRN1Q8IZH2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 PRUNEP1-201ENST00000425846 705 ntBASIC8.15□□□□□ -1.11
XRN1Q8IZH2 AL035090.1-201ENST00000454835 332 ntBASIC8.15□□□□□ -1.11
XRN1Q8IZH2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.15□□□□□ -1.11
XRN1Q8IZH2 AC020765.1-201ENST00000604296 328 ntBASIC8.15□□□□□ -1.11
XRN1Q8IZH2 AL118522.2-201ENST00000616045 615 ntBASIC8.15□□□□□ -1.11
XRN1Q8IZH2 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 CDY5P-201ENST00000411487 1580 ntBASIC8.14□□□□□ -1.11
XRN1Q8IZH2 CDY9P-201ENST00000451397 1580 ntBASIC8.14□□□□□ -1.11
XRN1Q8IZH2 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AC015977.1-201ENST00000418887 292 ntBASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AC009784.1-201ENST00000426484 460 ntBASIC8.14□□□□□ -1.11
XRN1Q8IZH2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 CYCSP6-201ENST00000434498 302 ntBASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 RN7SL165P-201ENST00000477476 291 ntBASIC8.14□□□□□ -1.11
XRN1Q8IZH2 RPSAP50-201ENST00000481955 852 ntBASIC8.14□□□□□ -1.11
XRN1Q8IZH2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AC018809.2-201ENST00000602436 3823 ntBASIC8.14□□□□□ -1.11
XRN1Q8IZH2 AL121612.2-201ENST00000612261 482 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms