Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 RN7SL836P-201ENST00000476140 296 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC106822.1-201ENST00000502647 526 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 HMGN1P17-201ENST00000513734 295 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC008429.4-201ENST00000521201 182 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AP000619.2-201ENST00000546014 969 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AC138207.8-204ENST00000579588 527 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 GLYATL1P2-202ENST00000588046 902 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AL138960.1-201ENST00000613838 513 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AL442128.2-201ENST00000620246 1824 ntBASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC65Q8IXS2 AP004289.1-201ENST00000436307 2205 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC016583.1-201ENST00000624221 2431 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 Z95114.1-201ENST00000624264 14574 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC022325.1-201ENST00000502748 2199 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 RNU105B-201ENST00000364478 208 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 YWHAZP6-201ENST00000399764 738 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AL035422.1-201ENST00000414193 397 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 PTCD2P2-201ENST00000415579 1095 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AL359885.1-201ENST00000415786 903 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 RPL35AP31-201ENST00000418340 337 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 RPS15AP30-201ENST00000420976 390 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AL731534.1-201ENST00000434711 269 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC096632.2-201ENST00000438139 1239 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AL512593.1-201ENST00000444758 779 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC010240.2-201ENST00000445363 1205 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC002553.3-201ENST00000453002 341 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC004232.2-201ENST00000574245 821 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 MIR132-201ENST00000591554 101 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 SMIM12P1-201ENST00000603004 274 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC005828.7-201ENST00000607331 556 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 RFPL4AP6-201ENST00000616792 846 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AL109924.4-201ENST00000623089 670 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AL078595.2-201ENST00000605309 1780 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 AC005725.1-201ENST00000577346 2607 ntBASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC65Q8IXS2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC027575.3-201ENST00000583058 2747 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 SNORA21-201ENST00000362423 132 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC130360.1-201ENST00000425489 1117 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC108479.1-201ENST00000431142 427 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 GAPDHP59-201ENST00000435908 267 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 RN7SL254P-201ENST00000460609 284 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 RPL23AP40-201ENST00000487630 390 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 AC112484.3-201ENST00000505910 329 ntBASIC6.76□□□□□ -1.33
CCDC65Q8IXS2 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms