Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CDH4P55283 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH4P55283 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 BX284613.1-201ENST00000452221 1641 ntBASIC6.26□□□□□ -1.41
CDH4P55283 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CDH4P55283 AC008627.1-201ENST00000517511 1704 ntBASIC6.26□□□□□ -1.41
CDH4P55283 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 OR56A4-201ENST00000330728 1209 ntBASIC6.26□□□□□ -1.41
CDH4P55283 RNA5SP375-201ENST00000362975 119 ntBASIC6.26□□□□□ -1.41
CDH4P55283 RAB5CP1-201ENST00000395972 580 ntBASIC6.26□□□□□ -1.41
CDH4P55283 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 OR7E156P-201ENST00000400303 464 ntBASIC6.26□□□□□ -1.41
CDH4P55283 SNORA77.2-201ENST00000408571 112 ntBASIC6.26□□□□□ -1.41
CDH4P55283 RPS17P17-201ENST00000419392 409 ntBASIC6.26□□□□□ -1.41
CDH4P55283 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.26□□□□□ -1.41
CDH4P55283 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH4P55283 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CDH4P55283 AC110602.1-201ENST00000437414 318 ntBASIC6.26□□□□□ -1.41
CDH4P55283 ATP5LP2-201ENST00000440646 311 ntBASIC6.26□□□□□ -1.41
CDH4P55283 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH4P55283 RAB28P2-201ENST00000454299 641 ntBASIC6.26□□□□□ -1.41
CDH4P55283 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH4P55283 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH4P55283 AC005363.1-201ENST00000530779 351 ntBASIC6.26□□□□□ -1.41
CDH4P55283 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH4P55283 AC079315.1-201ENST00000602952 623 ntBASIC6.26□□□□□ -1.41
CDH4P55283 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.26□□□□□ -1.41
CDH4P55283 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH4P55283 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH4P55283 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH4P55283 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 OLMALINC-203ENST00000641087 3779 ntBASIC6.26□□□□□ -1.41
CDH4P55283 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CDH4P55283 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH4P55283 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
CDH4P55283 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CDH4P55283 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH4P55283 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.25□□□□□ -1.41
CDH4P55283 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH4P55283 NCOA4P2-201ENST00000340589 1813 ntBASIC6.25□□□□□ -1.41
CDH4P55283 AC004386.1-201ENST00000393214 761 ntBASIC6.25□□□□□ -1.41
CDH4P55283 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.25□□□□□ -1.41
CDH4P55283 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.25□□□□□ -1.41
CDH4P55283 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.25□□□□□ -1.41
CDH4P55283 AC092865.4-201ENST00000477936 615 ntBASIC6.25□□□□□ -1.41
CDH4P55283 AC114728.1-201ENST00000488289 483 ntBASIC6.25□□□□□ -1.41
CDH4P55283 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH4P55283 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH4P55283 OR56A7P-201ENST00000524865 941 ntBASIC6.25□□□□□ -1.41
CDH4P55283 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH4P55283 AC245014.3-201ENST00000618589 347 ntBASIC6.25□□□□□ -1.41
CDH4P55283 AL157762.1-201ENST00000619612 415 ntBASIC6.25□□□□□ -1.41
CDH4P55283 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CDH4P55283 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CDH4P55283 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH4P55283 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH4P55283 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH4P55283 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH4P55283 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH4P55283 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH4P55283 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CDH4P55283 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH4P55283 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH4P55283 CASC19-238ENST00000641523 1558 ntBASIC6.24□□□□□ -1.41
CDH4P55283 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH4P55283 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CDH4P55283 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CDH4P55283 RN7SKP275-201ENST00000364626 301 ntBASIC6.24□□□□□ -1.41
CDH4P55283 LCN1P2-201ENST00000372030 223 ntBASIC6.24□□□□□ -1.41
CDH4P55283 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH4P55283 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH4P55283 RN7SKP151-201ENST00000410230 316 ntBASIC6.24□□□□□ -1.41
CDH4P55283 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH4P55283 AL138899.2-201ENST00000439139 499 ntBASIC6.24□□□□□ -1.41
CDH4P55283 RPL5P10-201ENST00000445207 894 ntBASIC6.24□□□□□ -1.41
CDH4P55283 UBE2V2P4-201ENST00000447495 259 ntBASIC6.24□□□□□ -1.41
CDH4P55283 AC016027.4-201ENST00000450866 277 ntBASIC6.24□□□□□ -1.41
CDH4P55283 CFL1P4-201ENST00000451536 498 ntBASIC6.24□□□□□ -1.41
CDH4P55283 RN7SL352P-201ENST00000466002 277 ntBASIC6.24□□□□□ -1.41
CDH4P55283 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms