Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC111000.2-201ENST00000507775 550 ntBASIC7.78□□□□□ -1.16
USP11P51784 AC112518.2-201ENST00000508565 425 ntBASIC7.78□□□□□ -1.16
USP11P51784 AC008868.1-201ENST00000509786 737 ntBASIC7.78□□□□□ -1.16
USP11P51784 SNX18P23-201ENST00000510867 677 ntBASIC7.78□□□□□ -1.16
USP11P51784 AC008549.1-201ENST00000512900 643 ntBASIC7.78□□□□□ -1.16
USP11P51784 MTCO2P32-201ENST00000514865 403 ntBASIC7.78□□□□□ -1.16
USP11P51784 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.78□□□□□ -1.16
USP11P51784 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
USP11P51784 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.78□□□□□ -1.16
USP11P51784 AC023050.2-201ENST00000544968 387 ntBASIC7.78□□□□□ -1.16
USP11P51784 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.78□□□□□ -1.16
USP11P51784 AC007346.2-201ENST00000564816 892 ntBASIC7.78□□□□□ -1.16
USP11P51784 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.78□□□□□ -1.16
USP11P51784 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
USP11P51784 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.78□□□□□ -1.16
USP11P51784 MIR4312-201ENST00000579909 76 ntBASIC7.78□□□□□ -1.16
USP11P51784 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.78□□□□□ -1.16
USP11P51784 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.78□□□□□ -1.16
USP11P51784 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.78□□□□□ -1.16
USP11P51784 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.78□□□□□ -1.16
USP11P51784 AC109347.2-201ENST00000610220 349 ntBASIC7.78□□□□□ -1.16
USP11P51784 AL356752.1-201ENST00000615844 593 ntBASIC7.78□□□□□ -1.16
USP11P51784 MIR1264-201ENST00000616374 69 ntBASIC7.78□□□□□ -1.16
USP11P51784 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC7.78□□□□□ -1.16
USP11P51784 RNF19BPY-201ENST00000458209 1550 ntBASIC7.78□□□□□ -1.16
USP11P51784 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
USP11P51784 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.78□□□□□ -1.16
USP11P51784 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.78□□□□□ -1.16
USP11P51784 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
USP11P51784 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.77□□□□□ -1.16
USP11P51784 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.77□□□□□ -1.16
USP11P51784 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.77□□□□□ -1.17
USP11P51784 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.77□□□□□ -1.17
USP11P51784 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
USP11P51784 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.77□□□□□ -1.17
USP11P51784 ZNF876P-202ENST00000398732 1485 ntBASIC7.77□□□□□ -1.17
USP11P51784 TCP1P3-201ENST00000414406 1498 ntBASIC7.77□□□□□ -1.17
USP11P51784 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.77□□□□□ -1.17
USP11P51784 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
USP11P51784 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
USP11P51784 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
USP11P51784 RNU5B-4P-201ENST00000363508 111 ntBASIC7.77□□□□□ -1.17
USP11P51784 AL136100.1-201ENST00000407696 330 ntBASIC7.77□□□□□ -1.17
USP11P51784 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 RNU4-72P-201ENST00000410754 173 ntBASIC7.77□□□□□ -1.17
USP11P51784 NEK4P1-201ENST00000433383 879 ntBASIC7.77□□□□□ -1.17
USP11P51784 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.77□□□□□ -1.17
USP11P51784 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.77□□□□□ -1.17
USP11P51784 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.77□□□□□ -1.17
USP11P51784 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.77□□□□□ -1.17
USP11P51784 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
USP11P51784 AC022730.1-201ENST00000473114 568 ntBASIC7.77□□□□□ -1.17
USP11P51784 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.77□□□□□ -1.17
USP11P51784 PFN1P8-201ENST00000497012 543 ntBASIC7.77□□□□□ -1.17
USP11P51784 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.77□□□□□ -1.17
USP11P51784 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.77□□□□□ -1.17
USP11P51784 AC093325.1-201ENST00000508378 326 ntBASIC7.77□□□□□ -1.17
USP11P51784 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.77□□□□□ -1.17
USP11P51784 AC021146.10-201ENST00000515628 706 ntBASIC7.77□□□□□ -1.17
USP11P51784 RNU6-889P-201ENST00000517189 103 ntBASIC7.77□□□□□ -1.17
USP11P51784 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.77□□□□□ -1.17
USP11P51784 AP002004.1-206ENST00000532441 876 ntBASIC7.77□□□□□ -1.17
USP11P51784 MTCO2P15-201ENST00000532655 656 ntBASIC7.77□□□□□ -1.17
USP11P51784 OR5BK1P-201ENST00000550421 823 ntBASIC7.77□□□□□ -1.17
USP11P51784 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.77□□□□□ -1.17
USP11P51784 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.77□□□□□ -1.17
USP11P51784 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC7.77□□□□□ -1.17
USP11P51784 IGLJCOR18-201ENST00000584002 424 ntBASIC7.77□□□□□ -1.17
USP11P51784 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.77□□□□□ -1.17
USP11P51784 FAM60CP-201ENST00000591086 664 ntBASIC7.77□□□□□ -1.17
USP11P51784 AP003465.2-201ENST00000602571 373 ntBASIC7.77□□□□□ -1.17
USP11P51784 AL591222.2-201ENST00000604443 754 ntBASIC7.77□□□□□ -1.17
USP11P51784 HIRAP1-201ENST00000605318 787 ntBASIC7.77□□□□□ -1.17
USP11P51784 AC103591.3-201ENST00000608684 209 ntBASIC7.77□□□□□ -1.17
USP11P51784 AL603755.1-201ENST00000619504 163 ntBASIC7.77□□□□□ -1.17
USP11P51784 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 AC079298.2-201ENST00000623885 459 ntBASIC7.77□□□□□ -1.17
USP11P51784 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.77□□□□□ -1.17
USP11P51784 SNORA16A-202ENST00000628458 135 ntBASIC7.77□□□□□ -1.17
USP11P51784 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USP11P51784 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms