Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC005244.1-201ENST00000582566 339 ntBASIC6.47□□□□□ -1.37
LHX1P48742 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.47□□□□□ -1.37
LHX1P48742 AC060766.1-201ENST00000590824 627 ntBASIC6.47□□□□□ -1.37
LHX1P48742 AL365181.4-201ENST00000609800 547 ntBASIC6.47□□□□□ -1.37
LHX1P48742 MIR6861-201ENST00000618657 64 ntBASIC6.47□□□□□ -1.37
LHX1P48742 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.47□□□□□ -1.37
LHX1P48742 AC096708.4-201ENST00000620563 552 ntBASIC6.47□□□□□ -1.37
LHX1P48742 AP003072.5-201ENST00000623872 773 ntBASIC6.47□□□□□ -1.37
LHX1P48742 AL357562.1-201ENST00000624911 609 ntBASIC6.47□□□□□ -1.37
LHX1P48742 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.47□□□□□ -1.37
LHX1P48742 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 RBPJP7-201ENST00000442803 1447 ntBASIC6.47□□□□□ -1.37
LHX1P48742 RBPJP5-201ENST00000449433 1447 ntBASIC6.47□□□□□ -1.37
LHX1P48742 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LHX1P48742 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.47□□□□□ -1.37
LHX1P48742 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.47□□□□□ -1.37
LHX1P48742 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX1P48742 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LHX1P48742 AC006511.3-201ENST00000624929 1783 ntBASIC6.46□□□□□ -1.37
LHX1P48742 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
LHX1P48742 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.46□□□□□ -1.37
LHX1P48742 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.46□□□□□ -1.37
LHX1P48742 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
LHX1P48742 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.46□□□□□ -1.37
LHX1P48742 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.46□□□□□ -1.38
LHX1P48742 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.46□□□□□ -1.38
LHX1P48742 SUGT1P2-201ENST00000379452 992 ntBASIC6.46□□□□□ -1.38
LHX1P48742 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.46□□□□□ -1.38
LHX1P48742 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 AC245884.2-201ENST00000426257 404 ntBASIC6.46□□□□□ -1.38
LHX1P48742 KCTD9P1-201ENST00000430462 1167 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 AL445466.1-201ENST00000448432 357 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AL359839.1-201ENST00000451975 1160 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AC112187.1-201ENST00000455837 479 ntBASIC6.46□□□□□ -1.38
LHX1P48742 CST12P-201ENST00000457644 362 ntBASIC6.46□□□□□ -1.38
LHX1P48742 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 AC094085.1-201ENST00000468914 584 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 SCARNA18.1-201ENST00000516330 83 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
LHX1P48742 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.46□□□□□ -1.38
LHX1P48742 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.46□□□□□ -1.38
LHX1P48742 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.46□□□□□ -1.38
LHX1P48742 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.46□□□□□ -1.38
LHX1P48742 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 AC108673.3-201ENST00000609183 335 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AL137246.2-201ENST00000613439 662 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AL136228.1-201ENST00000622221 319 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AC119674.1-202ENST00000641333 1860 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AC007998.4-201ENST00000612496 2533 ntBASIC6.46□□□□□ -1.38
LHX1P48742 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.46□□□□□ -1.38
LHX1P48742 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.46□□□□□ -1.38
LHX1P48742 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX1P48742 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 AC007406.5-201ENST00000570140 3170 ntBASIC6.45□□□□□ -1.38
LHX1P48742 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
LHX1P48742 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LHX1P48742 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
LHX1P48742 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 RNFT1P3-201ENST00000340898 1052 ntBASIC6.45□□□□□ -1.38
LHX1P48742 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
LHX1P48742 RN7SKP151-201ENST00000410230 316 ntBASIC6.45□□□□□ -1.38
LHX1P48742 AC116036.1-201ENST00000412199 367 ntBASIC6.45□□□□□ -1.38
LHX1P48742 AL691447.1-201ENST00000419456 387 ntBASIC6.45□□□□□ -1.38
LHX1P48742 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.45□□□□□ -1.38
LHX1P48742 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.45□□□□□ -1.38
LHX1P48742 TUBB4BP6-201ENST00000437576 479 ntBASIC6.45□□□□□ -1.38
LHX1P48742 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.45□□□□□ -1.38
LHX1P48742 RPL17P2-201ENST00000491913 451 ntBASIC6.45□□□□□ -1.38
LHX1P48742 CYP4F27P-201ENST00000514557 494 ntBASIC6.45□□□□□ -1.38
LHX1P48742 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.45□□□□□ -1.38
LHX1P48742 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.45□□□□□ -1.38
LHX1P48742 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.45□□□□□ -1.38
LHX1P48742 OR4A40P-201ENST00000533878 948 ntBASIC6.45□□□□□ -1.38
LHX1P48742 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.45□□□□□ -1.38
LHX1P48742 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 AP001885.1-201ENST00000621658 558 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms