Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC067773.1-201ENST00000603284 1094 ntBASIC5.71□□□□□ -1.5
RFC3P40938 SNORA74.4-201ENST00000607595 199 ntBASIC5.71□□□□□ -1.5
RFC3P40938 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.71□□□□□ -1.5
RFC3P40938 AL136097.3-201ENST00000611097 505 ntBASIC5.71□□□□□ -1.5
RFC3P40938 AL512652.1-201ENST00000619006 500 ntBASIC5.71□□□□□ -1.5
RFC3P40938 FAM27E2-201ENST00000619668 403 ntBASIC5.71□□□□□ -1.5
RFC3P40938 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.71□□□□□ -1.5
RFC3P40938 MIR7159-201ENST00000620587 66 ntBASIC5.71□□□□□ -1.5
RFC3P40938 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.71□□□□□ -1.5
RFC3P40938 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RFC3P40938 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.71□□□□□ -1.5
RFC3P40938 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 AC013488.1-201ENST00000526618 1838 ntBASIC5.71□□□□□ -1.5
RFC3P40938 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RFC3P40938 DOCK11P1-201ENST00000553480 5932 ntBASIC5.71□□□□□ -1.5
RFC3P40938 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.71□□□□□ -1.5
RFC3P40938 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.71□□□□□ -1.5
RFC3P40938 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFC3P40938 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.71□□□□□ -1.5
RFC3P40938 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.7□□□□□ -1.5
RFC3P40938 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
RFC3P40938 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 LCN1P2-201ENST00000372030 223 ntBASIC5.7□□□□□ -1.5
RFC3P40938 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.7□□□□□ -1.5
RFC3P40938 IPPKP1-201ENST00000422501 768 ntBASIC5.7□□□□□ -1.5
RFC3P40938 CYCSP52-201ENST00000422857 310 ntBASIC5.7□□□□□ -1.5
RFC3P40938 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 AL353662.1-201ENST00000439099 327 ntBASIC5.7□□□□□ -1.5
RFC3P40938 ATP5LP2-201ENST00000440646 311 ntBASIC5.7□□□□□ -1.5
RFC3P40938 RBMY2AP-201ENST00000445405 1157 ntBASIC5.7□□□□□ -1.5
RFC3P40938 RBMY2CP-201ENST00000448575 1157 ntBASIC5.7□□□□□ -1.5
RFC3P40938 RBMY2DP-202ENST00000448881 1157 ntBASIC5.7□□□□□ -1.5
RFC3P40938 RBMY2BP-202ENST00000451071 1156 ntBASIC5.7□□□□□ -1.5
RFC3P40938 RN7SL326P-201ENST00000477493 296 ntBASIC5.7□□□□□ -1.5
RFC3P40938 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 KHDC1P1-201ENST00000511053 508 ntBASIC5.7□□□□□ -1.5
RFC3P40938 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 NATP-201ENST00000523491 878 ntBASIC5.7□□□□□ -1.5
RFC3P40938 TRIM51DP-201ENST00000529746 596 ntBASIC5.7□□□□□ -1.5
RFC3P40938 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 MIR4701-201ENST00000583094 63 ntBASIC5.7□□□□□ -1.5
RFC3P40938 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.7□□□□□ -1.5
RFC3P40938 AC008507.3-201ENST00000585753 472 ntBASIC5.7□□□□□ -1.5
RFC3P40938 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 AC092266.1-201ENST00000610958 165 ntBASIC5.7□□□□□ -1.5
RFC3P40938 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.7□□□□□ -1.5
RFC3P40938 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.7□□□□□ -1.5
RFC3P40938 AL355480.1-201ENST00000629041 99 ntBASIC5.7□□□□□ -1.5
RFC3P40938 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 AC079753.1-201ENST00000623243 3868 ntBASIC5.7□□□□□ -1.5
RFC3P40938 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RFC3P40938 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
RFC3P40938 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.7□□□□□ -1.5
RFC3P40938 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RFC3P40938 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 AC006511.3-201ENST00000624929 1783 ntBASIC5.7□□□□□ -1.5
RFC3P40938 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RFC3P40938 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFC3P40938 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 AC025809.2-201ENST00000625085 1802 ntBASIC5.69□□□□□ -1.5
RFC3P40938 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 AL161912.4-201ENST00000623889 2468 ntBASIC5.69□□□□□ -1.5
RFC3P40938 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 AC015799.1-201ENST00000622996 3122 ntBASIC5.69□□□□□ -1.5
RFC3P40938 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RFC3P40938 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFC3P40938 NPM1P37-201ENST00000403105 874 ntBASIC5.69□□□□□ -1.5
RFC3P40938 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.69□□□□□ -1.5
RFC3P40938 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC3P40938 IGLV3-4-201ENST00000432300 244 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms