Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AL139805.1-201ENST00000407837 289 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 RN7SKP144-201ENST00000411108 279 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 RNA5SP115-201ENST00000411160 107 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 RN7SKP108-201ENST00000411367 328 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.26□□□□□ -1.41
CTPS1P17812 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.26□□□□□ -1.41
CTPS1P17812 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.26□□□□□ -1.41
CTPS1P17812 AC016908.1-201ENST00000442571 1219 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AC010240.2-201ENST00000445363 1205 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AL451063.1-201ENST00000450164 1133 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AC118758.1-202ENST00000454719 225 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AC073594.1-201ENST00000462065 364 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.26□□□□□ -1.41
CTPS1P17812 HMGN1P8-201ENST00000463578 288 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 AP002453.1-201ENST00000492327 668 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.26□□□□□ -1.41
CTPS1P17812 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CTPS1P17812 AC108103.1-201ENST00000511286 446 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 MAST4-IT1-201ENST00000514241 658 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 SNORA81.2-201ENST00000516868 170 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 RNA5SP400-201ENST00000517155 111 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 AC036111.2-201ENST00000533247 901 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.26□□□□□ -1.41
CTPS1P17812 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 AC023310.2-201ENST00000553844 547 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 MRPS21P8-201ENST00000569196 235 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 TMF1P1-201ENST00000576058 373 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 MIR3189-201ENST00000578735 73 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 MIR4502-201ENST00000580432 81 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AP005136.2-201ENST00000583253 1049 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.26□□□□□ -1.41
CTPS1P17812 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.26□□□□□ -1.41
CTPS1P17812 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.26□□□□□ -1.41
CTPS1P17812 RFPL4AP6-201ENST00000616792 846 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.26□□□□□ -1.41
CTPS1P17812 AL357140.4-201ENST00000636827 412 ntBASIC6.26□□□□□ -1.41
CTPS1P17812 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CTPS1P17812 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CTPS1P17812 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.26□□□□□ -1.41
CTPS1P17812 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
CTPS1P17812 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CTPS1P17812 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTPS1P17812 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CTPS1P17812 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CTPS1P17812 LINC01616-201ENST00000561816 2280 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CTPS1P17812 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.25□□□□□ -1.41
CTPS1P17812 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CTPS1P17812 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.25□□□□□ -1.41
CTPS1P17812 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CTPS1P17812 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTPS1P17812 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.25□□□□□ -1.41
CTPS1P17812 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
CTPS1P17812 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CTPS1P17812 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.25□□□□□ -1.41
CTPS1P17812 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTPS1P17812 AC107977.1-201ENST00000355745 939 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 SNORA43.1-201ENST00000364863 140 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTPS1P17812 RPL7P58-201ENST00000402913 758 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.25□□□□□ -1.41
CTPS1P17812 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.25□□□□□ -1.41
CTPS1P17812 MTATP6P11-201ENST00000428071 670 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.25□□□□□ -1.41
CTPS1P17812 AL590004.3-202ENST00000445883 451 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 RN7SL221P-201ENST00000466190 281 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 RN7SL649P-201ENST00000496974 275 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.25□□□□□ -1.41
CTPS1P17812 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.25□□□□□ -1.41
CTPS1P17812 RNA5SP473-201ENST00000516402 125 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.25□□□□□ -1.41
CTPS1P17812 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.25□□□□□ -1.41
CTPS1P17812 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.25□□□□□ -1.41
CTPS1P17812 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.25□□□□□ -1.41
CTPS1P17812 AC024589.2-201ENST00000605642 1294 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CTPS1P17812 AC004836.1-201ENST00000623032 634 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 OR7A1P-202ENST00000641542 1158 ntBASIC6.25□□□□□ -1.41
CTPS1P17812 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.25□□□□□ -1.41
CTPS1P17812 AL137058.3-201ENST00000624531 3099 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms