Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 OR9A3P-202ENST00000485185 878 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC104986.1-201ENST00000517978 436 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 IGKV3-34-201ENST00000521692 293 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC087354.1-201ENST00000522373 1037 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 OR5B19P-201ENST00000531766 928 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 WARSP1-201ENST00000533936 454 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC137800.1-202ENST00000562098 446 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC013565.2-201ENST00000564874 310 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC090774.3-201ENST00000578666 742 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 MIR4742-201ENST00000581069 85 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AL713866.2-201ENST00000603579 219 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 PRELID3BP8-201ENST00000604148 295 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AP001330.4-201ENST00000604350 154 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AP000654.2-201ENST00000605633 586 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC011816.2-201ENST00000607089 556 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC004696.1-201ENST00000614345 607 ntBASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
VPS9D1Q9Y2B5 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AC061975.5-201ENST00000584928 1441 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 Z97200.1-201ENST00000606154 2045 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AC092447.10-201ENST00000620607 1652 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 NMD3P1-201ENST00000439704 1488 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RN7SKP44-201ENST00000363602 316 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 Y_RNA.176-201ENST00000363815 109 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 CREM-213ENST00000374734 711 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 COX17P1-201ENST00000378775 192 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RNU6-316P-201ENST00000391027 107 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AL031229.1-201ENST00000404273 224 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RNU2-64P-201ENST00000411315 191 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RNU6-195P-201ENST00000411352 109 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RPL34P3-201ENST00000421454 338 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 OR5W1P-201ENST00000423705 938 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RPL10P5-201ENST00000427719 639 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 ISCA1P6-201ENST00000427740 390 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RPL36AP53-201ENST00000432891 316 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 MTCO3P10-201ENST00000455912 772 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RN7SL541P-201ENST00000464317 283 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RN7SL401P-201ENST00000470065 298 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RNF7P1-201ENST00000478598 342 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 CREM-231ENST00000479070 939 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 HMGN2P25-201ENST00000486956 268 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 HMGB3P15-201ENST00000507326 574 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RNU6-559P-201ENST00000516151 98 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RN7SKP31-201ENST00000516354 278 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AC034105.3-201ENST00000565294 442 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RN7SL203P-201ENST00000579600 296 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RN7SL198P-201ENST00000583190 258 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AC125494.2-201ENST00000602431 657 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 CYP2C61P-201ENST00000604072 290 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 uc_338.22-201ENST00000622722 187 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 ALG13-226ENST00000622986 582 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS9D1Q9Y2B5 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms