Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
ZNRF3Q9ULT6 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
ZNRF3Q9ULT6 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.9□□□□□ -1.15
ZNRF3Q9ULT6 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ZNRF3Q9ULT6 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.15
ZNRF3Q9ULT6 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
ZNRF3Q9ULT6 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ZNRF3Q9ULT6 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
ZNRF3Q9ULT6 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC074141.1-201ENST00000588129 2995 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 OR4C1P-202ENST00000641065 1569 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AL354854.1-201ENST00000455940 1363 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 RPL22P22-201ENST00000395439 379 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC005005.2-201ENST00000420779 380 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 PTP4A1P7-201ENST00000423476 514 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 RPL23AP19-201ENST00000436229 369 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AL590004.3-202ENST00000445883 451 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AL096829.2-201ENST00000446582 742 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 Z83846.1-201ENST00000446798 265 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC069306.1-201ENST00000507006 843 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC112225.1-201ENST00000508230 297 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC105313.1-201ENST00000509121 353 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC060775.1-201ENST00000518241 520 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 UBTFL10-201ENST00000528532 562 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC016144.1-201ENST00000548175 1087 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC092868.3-201ENST00000560515 784 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 CSNK1A1P1-202ENST00000563423 981 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC092332.1-201ENST00000563684 829 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC008751.2-201ENST00000597885 980 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC073046.2-201ENST00000604756 527 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC018659.2-201ENST00000624690 715 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC034111.1-201ENST00000562143 3770 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 CR788268.1-201ENST00000603931 1809 ntBASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZNRF3Q9ULT6 AC012321.1-201ENST00000561622 1588 ntBASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 AC083806.2-201ENST00000617795 2685 ntBASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZNRF3Q9ULT6 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms