Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 CAP1P2-201ENST00000417455 1409 ntBASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIMS3Q9UJD0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC007998.4-201ENST00000612496 2533 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 RN7SKP145-201ENST00000363291 303 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 ZNF37CP-201ENST00000406795 241 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 RN7SKP166-201ENST00000410812 305 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 GTF3AP6-201ENST00000432585 986 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC242426.1-201ENST00000435270 960 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 HMGN1P32-201ENST00000441744 256 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 GAPDHP23-201ENST00000444823 993 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 RN7SL369P-201ENST00000477138 299 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 NPM1P28-201ENST00000492269 840 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC105420.1-201ENST00000504389 582 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC084851.2-201ENST00000530377 364 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 RPL41P2-201ENST00000544920 409 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC008055.1-201ENST00000547032 609 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 SNORA74.4-201ENST00000607595 199 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 AL008582.1-201ENST00000609612 442 ntBASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.7□□□□□ -1.5
RIMS3Q9UJD0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AP005435.3-201ENST00000531260 3198 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 RN7SKP69-201ENST00000365390 305 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AC087752.1-201ENST00000391360 558 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 RN7SKP279-201ENST00000411383 298 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 BX119904.3-201ENST00000428194 957 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 NPM1P9-201ENST00000453156 844 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 RN7SL326P-201ENST00000477493 296 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 SLC25A51P2-201ENST00000535708 889 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 SNX18P12-201ENST00000624821 759 ntBASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIMS3Q9UJD0 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms