Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC168Q8NDH2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC168Q8NDH2 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC168Q8NDH2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC168Q8NDH2 AP005139.1-201ENST00000580702 1647 ntBASIC5.13□□□□□ -1.59
CCDC168Q8NDH2 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 RN7SKP128-201ENST00000364270 303 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 RNA5SP156-201ENST00000410250 110 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 RN7SL72P-201ENST00000460697 269 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 EIF1P7-201ENST00000487533 337 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 NENFP3-201ENST00000503735 313 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AL354718.1-201ENST00000619764 589 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC131009.3-201ENST00000621809 287 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 OR13C1P-202ENST00000641378 2919 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC016739.1-201ENST00000405359 345 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AL355375.1-201ENST00000405686 392 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC016397.1-201ENST00000412463 242 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 RPS26P13-201ENST00000419030 330 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC012075.1-201ENST00000436549 580 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 OR8G3P-201ENST00000533406 921 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 AL049779.2-201ENST00000553847 315 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 MIR4697-201ENST00000582977 78 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 BUB1P1-201ENST00000603541 607 ntBASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC168Q8NDH2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AC023818.2-201ENST00000623817 2304 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 U8.4-201ENST00000363626 134 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 IGLV2-34-201ENST00000490007 283 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AC092865.1-201ENST00000544395 1023 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 GSTP1P1-201ENST00000548078 319 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AC137768.1-201ENST00000549998 553 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AC245389.2-201ENST00000616023 576 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 AC242843.1-201ENST00000618702 573 ntBASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC168Q8NDH2 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms