Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC025016.1-201ENST00000616746 682 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC010608.2-201ENST00000624830 470 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 MIR1322-201ENST00000638013 71 ntBASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
RNF43Q68DV7 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RNF43Q68DV7 CASC19-238ENST00000641523 1558 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF43Q68DV7 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 ENO1P4-201ENST00000416471 1785 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF43Q68DV7 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RNF43Q68DV7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC023490.2-201ENST00000359859 470 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 RNU4-81P-201ENST00000363561 144 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 SNORA3.1-201ENST00000408166 111 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL158050.1-201ENST00000416077 457 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 CUBNP2-201ENST00000443534 1139 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 KF459542.1-201ENST00000450908 553 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 MTCYBP1-201ENST00000454315 1119 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 RN7SL149P-201ENST00000465197 281 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 SETP6-201ENST00000479329 568 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC044810.1-201ENST00000480271 711 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 RPL7P40-201ENST00000481703 745 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC011037.1-201ENST00000483964 558 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC116353.2-201ENST00000505332 712 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC093752.1-206ENST00000511823 336 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AP003084.1-201ENST00000524828 742 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 NDUFA3P2-201ENST00000531434 232 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 ADI1P3-201ENST00000549509 470 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC027104.1-201ENST00000563702 681 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC087481.2-201ENST00000565492 330 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC138749.2-201ENST00000566048 167 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL512347.1-201ENST00000566420 503 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 CBX3P2-202ENST00000583365 535 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL031985.2-201ENST00000600955 480 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AP003117.2-201ENST00000606010 545 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC108747.1-201ENST00000609508 535 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL008582.1-201ENST00000609612 442 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC025253.1-201ENST00000613623 543 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC008083.4-201ENST00000615076 444 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 FRG1HP-204ENST00000617940 757 ntBASIC7.54□□□□□ -1.2
RNF43Q68DV7 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms