Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.27□□□□□ -1.57
CDX1P47902 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.27□□□□□ -1.57
CDX1P47902 AC211486.4-201ENST00000621495 113 ntBASIC5.27□□□□□ -1.57
CDX1P47902 MIR6813-201ENST00000621638 56 ntBASIC5.27□□□□□ -1.57
CDX1P47902 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDX1P47902 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDX1P47902 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDX1P47902 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDX1P47902 AL442128.2-201ENST00000620246 1824 ntBASIC5.27□□□□□ -1.57
CDX1P47902 PPBPP2-201ENST00000513150 1362 ntBASIC5.27□□□□□ -1.57
CDX1P47902 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.27□□□□□ -1.57
CDX1P47902 MAPK10-379ENST00000642013 1385 ntBASIC5.27□□□□□ -1.57
CDX1P47902 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.27□□□□□ -1.57
CDX1P47902 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDX1P47902 AC004158.1-201ENST00000564508 4319 ntBASIC5.27□□□□□ -1.57
CDX1P47902 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.26□□□□□ -1.57
CDX1P47902 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.26□□□□□ -1.57
CDX1P47902 RNU6-152P-201ENST00000384037 107 ntBASIC5.26□□□□□ -1.57
CDX1P47902 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDX1P47902 FDPSP5-201ENST00000399474 1057 ntBASIC5.26□□□□□ -1.57
CDX1P47902 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 AL358178.1-201ENST00000407698 397 ntBASIC5.26□□□□□ -1.57
CDX1P47902 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 AL354766.1-201ENST00000423396 542 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.26□□□□□ -1.57
CDX1P47902 MTCO1P45-201ENST00000431457 267 ntBASIC5.26□□□□□ -1.57
CDX1P47902 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CDX1P47902 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 TXNP2-201ENST00000443918 295 ntBASIC5.26□□□□□ -1.57
CDX1P47902 RPL23AP28-201ENST00000448062 470 ntBASIC5.26□□□□□ -1.57
CDX1P47902 BUD31P2-201ENST00000449374 300 ntBASIC5.26□□□□□ -1.57
CDX1P47902 MORF4L1P4-201ENST00000450245 976 ntBASIC5.26□□□□□ -1.57
CDX1P47902 KF459542.1-201ENST00000450908 553 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC019084.1-201ENST00000457337 432 ntBASIC5.26□□□□□ -1.57
CDX1P47902 RN7SL382P-201ENST00000482631 282 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC117395.1-201ENST00000487390 403 ntBASIC5.26□□□□□ -1.57
CDX1P47902 RN7SL37P-201ENST00000490461 307 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.26□□□□□ -1.57
CDX1P47902 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.26□□□□□ -1.57
CDX1P47902 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 RN7SKP34-201ENST00000516142 244 ntBASIC5.26□□□□□ -1.57
CDX1P47902 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.26□□□□□ -1.57
CDX1P47902 AC008147.3-201ENST00000548666 354 ntBASIC5.26□□□□□ -1.57
CDX1P47902 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.26□□□□□ -1.57
CDX1P47902 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.26□□□□□ -1.57
CDX1P47902 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 AC024267.2-201ENST00000582737 417 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 AC012175.1-201ENST00000603755 531 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC097467.4-201ENST00000605504 141 ntBASIC5.26□□□□□ -1.57
CDX1P47902 RPL12P48-201ENST00000605620 304 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC084036.1-201ENST00000609190 508 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC091768.1-201ENST00000609258 930 ntBASIC5.26□□□□□ -1.57
CDX1P47902 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 AC015722.2-201ENST00000622210 551 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC005514.1-201ENST00000623521 208 ntBASIC5.26□□□□□ -1.57
CDX1P47902 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.26□□□□□ -1.57
CDX1P47902 AC000095.2-202ENST00000637415 154 ntBASIC5.26□□□□□ -1.57
CDX1P47902 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDX1P47902 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 LINC02019-201ENST00000608605 2060 ntBASIC5.26□□□□□ -1.57
CDX1P47902 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CDX1P47902 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CDX1P47902 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 RACGAP1P-201ENST00000550663 1879 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AC109446.4-201ENST00000623235 2755 ntBASIC5.26□□□□□ -1.57
CDX1P47902 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDX1P47902 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.25□□□□□ -1.57
CDX1P47902 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms