Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.05□□□□□ -1.28
COL4A5P29400 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A5P29400 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A5P29400 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.05□□□□□ -1.28
COL4A5P29400 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.05□□□□□ -1.28
COL4A5P29400 PPATP2-201ENST00000605635 508 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 MIR8089-201ENST00000620165 82 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 MIR6810-201ENST00000622701 70 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 OR52B5P-202ENST00000641118 1110 ntBASIC7.05□□□□□ -1.28
COL4A5P29400 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.05□□□□□ -1.28
COL4A5P29400 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
COL4A5P29400 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.05□□□□□ -1.28
COL4A5P29400 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.05□□□□□ -1.28
COL4A5P29400 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.05□□□□□ -1.28
COL4A5P29400 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL4A5P29400 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
COL4A5P29400 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
COL4A5P29400 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 MIR550A3-201ENST00000390735 95 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 AC009804.1-201ENST00000400949 179 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 RBMY2KP-201ENST00000418221 992 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 RPL7P61-201ENST00000451721 751 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 AC103563.5-201ENST00000455643 364 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 OR2AO1P-201ENST00000476497 403 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 RPSAP50-201ENST00000481955 852 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 CDH12P4-201ENST00000517835 295 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 CDH12P3-201ENST00000517935 295 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 CDH12P1-201ENST00000518435 295 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.04□□□□□ -1.28
COL4A5P29400 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.04□□□□□ -1.28
COL4A5P29400 OR4H6P-201ENST00000563771 921 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 MIR4436B2-201ENST00000581415 91 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 MIR4436B1-201ENST00000583272 91 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.04□□□□□ -1.28
COL4A5P29400 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.04□□□□□ -1.28
COL4A5P29400 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL4A5P29400 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 AC087516.1-201ENST00000561236 2428 ntBASIC7.04□□□□□ -1.28
COL4A5P29400 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.04□□□□□ -1.28
COL4A5P29400 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC7.04□□□□□ -1.28
COL4A5P29400 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL4A5P29400 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL4A5P29400 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
COL4A5P29400 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
COL4A5P29400 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
COL4A5P29400 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 VDAC2P4-201ENST00000452925 711 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 AC072052.1-201ENST00000496556 306 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.03□□□□□ -1.28
COL4A5P29400 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
COL4A5P29400 OR4A40P-201ENST00000533878 948 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.03□□□□□ -1.28
COL4A5P29400 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.03□□□□□ -1.28
COL4A5P29400 AC063977.5-201ENST00000601044 974 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 AC008937.3-201ENST00000606813 1700 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
COL4A5P29400 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC7.03□□□□□ -1.28
COL4A5P29400 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
COL4A5P29400 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A5P29400 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 RNA5SP30-201ENST00000365552 115 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 RNU1-77P-201ENST00000390868 162 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A5P29400 CYCSP6-201ENST00000434498 302 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 AL022237.1-201ENST00000446663 358 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 AP000547.1-201ENST00000454360 617 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 AC004129.2-201ENST00000457229 287 ntBASIC7.03□□□□□ -1.28
COL4A5P29400 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms