Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.76□□□□□ -1.33
COL11A1P12107 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
COL11A1P12107 AC007842.1-201ENST00000597336 2039 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.76□□□□□ -1.33
COL11A1P12107 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 MYL6P5-201ENST00000412707 459 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 RPL35AP24-201ENST00000413846 330 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.76□□□□□ -1.33
COL11A1P12107 PTMAP6-201ENST00000439110 327 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 AL390119.1-201ENST00000440329 312 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.76□□□□□ -1.33
COL11A1P12107 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.76□□□□□ -1.33
COL11A1P12107 AC006539.1-201ENST00000481419 501 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 SNORA43.3-201ENST00000517240 103 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 AC091078.2-201ENST00000557145 559 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 AC004948.1-201ENST00000609858 672 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.76□□□□□ -1.33
COL11A1P12107 AC087565.3-203ENST00000641018 837 ntBASIC6.76□□□□□ -1.33
COL11A1P12107 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL11A1P12107 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 USP9YP3-201ENST00000434481 1766 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
COL11A1P12107 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 AL031651.1-201ENST00000615357 1438 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.75□□□□□ -1.33
COL11A1P12107 AL049634.1-201ENST00000453770 1720 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL11A1P12107 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.75□□□□□ -1.33
COL11A1P12107 MIR105-2-201ENST00000385083 81 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL11A1P12107 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.75□□□□□ -1.33
COL11A1P12107 AL596448.1-201ENST00000415024 392 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 Z93019.1-201ENST00000416450 973 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 OR5W1P-201ENST00000423705 938 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 AL035690.1-201ENST00000490892 383 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.75□□□□□ -1.33
COL11A1P12107 AC079395.2-201ENST00000610982 737 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 MIR6719-201ENST00000622428 87 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.75□□□□□ -1.33
COL11A1P12107 AL121768.1-201ENST00000613917 2544 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.75□□□□□ -1.33
COL11A1P12107 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 AC107398.3-201ENST00000562284 7000 ntBASIC6.75□□□□□ -1.33
COL11A1P12107 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL11A1P12107 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL11A1P12107 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.74□□□□□ -1.33
COL11A1P12107 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COL11A1P12107 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.74□□□□□ -1.33
COL11A1P12107 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 AC092724.1-201ENST00000624623 3397 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 GABARAPL3-201ENST00000412799 354 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 RPS6P23-201ENST00000413224 722 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 NME1P1-201ENST00000420914 382 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 DEFA9P-201ENST00000433042 285 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 AL627308.1-201ENST00000435693 821 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.74□□□□□ -1.33
COL11A1P12107 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.74□□□□□ -1.33
COL11A1P12107 AL162739.1-201ENST00000450606 307 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 AC007386.1-201ENST00000455212 582 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 GARSP1-201ENST00000570895 719 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 AL589674.2-201ENST00000604304 337 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 AC004890.3-201ENST00000605566 1095 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.74□□□□□ -1.33
COL11A1P12107 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.74□□□□□ -1.33
COL11A1P12107 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.74□□□□□ -1.33
COL11A1P12107 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.74□□□□□ -1.33
COL11A1P12107 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.74□□□□□ -1.33
COL11A1P12107 AC117409.1-201ENST00000470499 1310 ntBASIC6.74□□□□□ -1.33
COL11A1P12107 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL11A1P12107 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.73□□□□□ -1.33
COL11A1P12107 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL11A1P12107 U3.7-201ENST00000363668 216 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 RNA5SP211-201ENST00000365516 117 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.73□□□□□ -1.33
COL11A1P12107 NPM1P4-201ENST00000414095 812 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.73□□□□□ -1.33
COL11A1P12107 Z84478.1-201ENST00000438230 1219 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.73□□□□□ -1.33
COL11A1P12107 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms