Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL096800.1-201ENST00000405326 893 ntBASIC6.38□□□□□ -1.39
RETP07949 RN7SKP293-201ENST00000411389 296 ntBASIC6.38□□□□□ -1.39
RETP07949 AC112492.2-201ENST00000432774 1030 ntBASIC6.38□□□□□ -1.39
RETP07949 AL353662.1-201ENST00000439099 327 ntBASIC6.38□□□□□ -1.39
RETP07949 AL355355.1-201ENST00000442900 793 ntBASIC6.38□□□□□ -1.39
RETP07949 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.38□□□□□ -1.39
RETP07949 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.38□□□□□ -1.39
RETP07949 RN7SL643P-201ENST00000471845 291 ntBASIC6.38□□□□□ -1.39
RETP07949 RPL5P14-201ENST00000494197 878 ntBASIC6.38□□□□□ -1.39
RETP07949 ATP5LP3-201ENST00000514223 304 ntBASIC6.38□□□□□ -1.39
RETP07949 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.38□□□□□ -1.39
RETP07949 IGKV2-19-201ENST00000518132 283 ntBASIC6.38□□□□□ -1.39
RETP07949 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.38□□□□□ -1.39
RETP07949 NATP-201ENST00000523491 878 ntBASIC6.38□□□□□ -1.39
RETP07949 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.38□□□□□ -1.39
RETP07949 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 AC068305.2-201ENST00000550567 1205 ntBASIC6.38□□□□□ -1.39
RETP07949 SETP3-201ENST00000581726 813 ntBASIC6.38□□□□□ -1.39
RETP07949 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.38□□□□□ -1.39
RETP07949 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.38□□□□□ -1.39
RETP07949 AC005277.2-201ENST00000617898 390 ntBASIC6.38□□□□□ -1.39
RETP07949 AL354718.1-201ENST00000619764 589 ntBASIC6.38□□□□□ -1.39
RETP07949 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.38□□□□□ -1.39
RETP07949 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.38□□□□□ -1.39
RETP07949 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.38□□□□□ -1.39
RETP07949 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.38□□□□□ -1.39
RETP07949 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.38□□□□□ -1.39
RETP07949 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RETP07949 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.37□□□□□ -1.39
RETP07949 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 RBPJP7-201ENST00000442803 1447 ntBASIC6.37□□□□□ -1.39
RETP07949 RBPJP5-201ENST00000449433 1447 ntBASIC6.37□□□□□ -1.39
RETP07949 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RETP07949 OR52B3P-201ENST00000314715 928 ntBASIC6.37□□□□□ -1.39
RETP07949 FAM32BP-201ENST00000344033 333 ntBASIC6.37□□□□□ -1.39
RETP07949 MIR105-2-201ENST00000385083 81 ntBASIC6.37□□□□□ -1.39
RETP07949 RN7SKP286-201ENST00000410894 299 ntBASIC6.37□□□□□ -1.39
RETP07949 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.37□□□□□ -1.39
RETP07949 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.37□□□□□ -1.39
RETP07949 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RETP07949 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.37□□□□□ -1.39
RETP07949 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.37□□□□□ -1.39
RETP07949 RPS27AP2-201ENST00000457576 465 ntBASIC6.37□□□□□ -1.39
RETP07949 RPSAP39-201ENST00000467439 883 ntBASIC6.37□□□□□ -1.39
RETP07949 AC008410.1-201ENST00000483777 339 ntBASIC6.37□□□□□ -1.39
RETP07949 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.37□□□□□ -1.39
RETP07949 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.37□□□□□ -1.39
RETP07949 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.37□□□□□ -1.39
RETP07949 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 AC079600.1-201ENST00000550326 297 ntBASIC6.37□□□□□ -1.39
RETP07949 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.37□□□□□ -1.39
RETP07949 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
RETP07949 AC090651.1-201ENST00000567865 634 ntBASIC6.37□□□□□ -1.39
RETP07949 AC106785.4-201ENST00000569492 412 ntBASIC6.37□□□□□ -1.39
RETP07949 SNORD95-201ENST00000579879 68 ntBASIC6.37□□□□□ -1.39
RETP07949 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.37□□□□□ -1.39
RETP07949 AC097467.4-201ENST00000605504 141 ntBASIC6.37□□□□□ -1.39
RETP07949 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.37□□□□□ -1.39
RETP07949 AL021707.7-201ENST00000607991 416 ntBASIC6.37□□□□□ -1.39
RETP07949 AC211433.2-201ENST00000608433 387 ntBASIC6.37□□□□□ -1.39
RETP07949 AC004477.3-201ENST00000614061 590 ntBASIC6.37□□□□□ -1.39
RETP07949 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.37□□□□□ -1.39
RETP07949 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.37□□□□□ -1.39
RETP07949 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.37□□□□□ -1.39
RETP07949 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.37□□□□□ -1.39
RETP07949 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RETP07949 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RETP07949 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
RETP07949 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RETP07949 LCOR-201ENST00000286067 4542 ntBASIC6.37□□□□□ -1.39
RETP07949 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.37□□□□□ -1.39
RETP07949 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.36□□□□□ -1.39
RETP07949 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.36□□□□□ -1.39
RETP07949 AC015689.2-201ENST00000528172 1738 ntBASIC6.36□□□□□ -1.39
RETP07949 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.36□□□□□ -1.39
RETP07949 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.36□□□□□ -1.39
RETP07949 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.36□□□□□ -1.39
RETP07949 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.36□□□□□ -1.39
RETP07949 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms