Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNOT4O95628 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
CNOT4O95628 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.39□□□□□ -1.39
CNOT4O95628 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.39□□□□□ -1.39
CNOT4O95628 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.39□□□□□ -1.39
CNOT4O95628 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNOT4O95628 RBPJP6-201ENST00000411556 1431 ntBASIC6.39□□□□□ -1.39
CNOT4O95628 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CNOT4O95628 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CNOT4O95628 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.39□□□□□ -1.39
CNOT4O95628 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.39□□□□□ -1.39
CNOT4O95628 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.39□□□□□ -1.39
CNOT4O95628 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.39□□□□□ -1.39
CNOT4O95628 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CNOT4O95628 AC126474.2-201ENST00000623268 1750 ntBASIC6.39□□□□□ -1.39
CNOT4O95628 CCAT2-201ENST00000630920 1752 ntBASIC6.39□□□□□ -1.39
CNOT4O95628 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 PARP4P1-201ENST00000435945 2337 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CNOT4O95628 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNOT4O95628 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.38□□□□□ -1.39
CNOT4O95628 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNOT4O95628 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 FAUP2-201ENST00000394301 401 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 AL391419.1-201ENST00000398901 1275 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CNOT4O95628 QRSL1P2-201ENST00000418582 964 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 HMGB1P49-201ENST00000418882 569 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 OR5M12P-201ENST00000423388 929 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 UQCRHP1-204ENST00000424609 274 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 RPL14P5-201ENST00000436474 730 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AL604028.2-201ENST00000437848 788 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 MTND1P1-201ENST00000445453 368 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.38□□□□□ -1.39
CNOT4O95628 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.38□□□□□ -1.39
CNOT4O95628 AC012123.2-201ENST00000485809 248 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.38□□□□□ -1.39
CNOT4O95628 AC107401.1-201ENST00000503426 685 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 PSMA2P2-201ENST00000504319 686 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AC008967.1-201ENST00000504843 163 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 SSX8-201ENST00000506270 579 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AC113420.1-201ENST00000507903 571 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 RPL7L1P7-201ENST00000509986 724 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 SNX18P25-201ENST00000510539 758 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 FABP5P6-201ENST00000510588 409 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AC027801.3-201ENST00000515049 698 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 SNORA3.4-201ENST00000515969 96 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 PDCL3P1-201ENST00000534575 734 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 MTND4P33-201ENST00000556706 766 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.38□□□□□ -1.39
CNOT4O95628 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.38□□□□□ -1.39
CNOT4O95628 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 CR382285.1-202ENST00000604687 547 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.38□□□□□ -1.39
CNOT4O95628 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.38□□□□□ -1.39
CNOT4O95628 AC016542.3-201ENST00000623520 619 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AC098679.5-201ENST00000624394 571 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.38□□□□□ -1.39
CNOT4O95628 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AL512353.3-201ENST00000417517 1326 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.38□□□□□ -1.39
CNOT4O95628 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 AC093844.1-201ENST00000514910 1361 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AC138915.4-201ENST00000565549 4147 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 AC125232.1-201ENST00000452554 1408 ntBASIC6.38□□□□□ -1.39
CNOT4O95628 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNOT4O95628 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNOT4O95628 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms