Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HNRNPCP2-201ENST00000399515 881 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 SETP22-201ENST00000412243 957 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC5.13□□□□□ -1.59
UPK1BO75841 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC5.13□□□□□ -1.59
UPK1BO75841 LINC02210-201ENST00000444561 288 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 TPT1P1-201ENST00000458495 518 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
UPK1BO75841 AL049874.2-201ENST00000492636 288 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1BO75841 SNX18P24-201ENST00000505249 671 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1BO75841 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1BO75841 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1BO75841 MIR4428-201ENST00000584884 73 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1BO75841 AL139124.1-201ENST00000609123 421 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 uc_338.26-201ENST00000612659 160 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
UPK1BO75841 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1BO75841 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC073862.2-201ENST00000625114 701 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
UPK1BO75841 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1BO75841 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.12□□□□□ -1.59
UPK1BO75841 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1BO75841 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1BO75841 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1BO75841 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.12□□□□□ -1.59
UPK1BO75841 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
UPK1BO75841 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1BO75841 RNA5SP375-201ENST00000362975 119 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 TMED5-201ENST00000370280 750 ntTSL 2 BASIC5.12□□□□□ -1.59
UPK1BO75841 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UPK1BO75841 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UPK1BO75841 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UPK1BO75841 EI24P3-201ENST00000399046 1062 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 RANP6-201ENST00000413691 644 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 SUMO2P8-201ENST00000434672 286 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 AL512593.1-201ENST00000444758 779 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 SNORD125-201ENST00000459538 96 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 AC021146.10-201ENST00000515628 706 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1BO75841 IGKV2D-38-201ENST00000518423 240 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 IGHV4-55-201ENST00000520889 368 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 AP001858.2-201ENST00000536213 601 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC5.12□□□□□ -1.59
UPK1BO75841 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.12□□□□□ -1.59
UPK1BO75841 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.12□□□□□ -1.59
UPK1BO75841 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1BO75841 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1BO75841 AC023389.2-201ENST00000580031 955 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 RN7SL475P-201ENST00000583379 298 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1BO75841 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1BO75841 AC140479.4-205ENST00000636339 820 ntBASIC5.12□□□□□ -1.59
UPK1BO75841 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.12□□□□□ -1.59
UPK1BO75841 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
UPK1BO75841 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 AL078595.2-201ENST00000605309 1780 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.11□□□□□ -1.59
UPK1BO75841 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 AC092681.1-201ENST00000297369 291 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1BO75841 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1BO75841 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms