Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC005618.4-201ENST00000625053 554 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 MAPK10-338ENST00000641647 3362 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AL449283.1-201ENST00000602631 3403 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC005224.3-201ENST00000584683 2140 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 BCORP1-203ENST00000513194 5093 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RN7SKP128-201ENST00000364270 303 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RNU1-84P-201ENST00000365447 164 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC245096.1-201ENST00000413104 546 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 BTG3P1-201ENST00000435859 716 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RPSAP40-201ENST00000442343 891 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 CUBNP2-201ENST00000443534 1139 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RN7SL369P-201ENST00000477138 299 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RN7SL326P-201ENST00000477493 296 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RPL23AP40-201ENST00000487630 390 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC090958.1-201ENST00000511122 351 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC114940.1-201ENST00000512162 1265 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RBMS2P1-201ENST00000525031 1226 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AP001858.2-201ENST00000536213 601 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC015674.1-201ENST00000578482 267 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RNU4ATAC-201ENST00000580972 127 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 MIR3187-201ENST00000583431 70 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC060780.2-201ENST00000589047 198 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AL158152.1-201ENST00000602652 1435 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AL049840.6-201ENST00000604583 345 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 SNORA74.4-201ENST00000607595 199 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AC010998.3-201ENST00000613871 631 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 QRSL1P3-201ENST00000552666 1316 ntBASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC28BQ9BUN5 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 VIM2P-201ENST00000402383 1294 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 RN7SKP221-201ENST00000410420 301 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC017078.1-201ENST00000416146 368 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 PPIAP23-201ENST00000420099 497 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 CDC42P6-201ENST00000421246 576 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 RPS7P14-201ENST00000426405 583 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 MTND2P40-201ENST00000436718 841 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 RPL12P18-201ENST00000437175 325 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 RPS10P18-201ENST00000442662 495 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 RN7SL72P-201ENST00000460697 269 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 RN7SL70P-201ENST00000478322 302 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 SNX18P24-201ENST00000505249 671 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 GLUD1P3-202ENST00000508551 200 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC111000.6-201ENST00000514471 709 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC092865.1-201ENST00000544395 1023 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms