Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 EDA-213ENST00000616899 4643 ntTSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC012653.2-201ENST00000621880 420 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 FO082842.1-201ENST00000423552 1370 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 RPL17P50-201ENST00000396131 546 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 CHMP1B2P-201ENST00000399581 597 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AL161747.1-201ENST00000480068 358 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC095057.1-201ENST00000507583 168 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 SS18L2P2-201ENST00000583960 235 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC010435.1-201ENST00000623353 1177 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC012313.8-201ENST00000595059 5402 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC119674.1-204ENST00000641348 1343 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 CYP4F30P-202ENST00000420048 405 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AL133325.1-201ENST00000421090 382 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 BNIP3P22-201ENST00000593399 556 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AL353662.3-201ENST00000625131 237 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 OR11H2-202ENST00000641517 1085 ntBASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC4.93□□□□□ -1.62
CSMD1Q96PZ7 AP002370.1-201ENST00000528055 1602 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms