Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC241377.2-202ENST00000636462 997 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AL139254.2-202ENST00000641937 1156 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC009831.5-201ENST00000624000 3189 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 BRD7P1-201ENST00000557705 1915 ntBASIC6.66□□□□□ -1.34
NUP43Q8NFH3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.66□□□□□ -1.34
NUP43Q8NFH3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 ENO1P4-201ENST00000416471 1785 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 MRPS17P1-201ENST00000596009 3130 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RPL10P16-201ENST00000325000 645 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 U6.112-201ENST00000384129 70 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RNU6-517P-201ENST00000384362 110 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RN7SKP62-201ENST00000384539 329 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 MIR199B-201ENST00000384849 110 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 MIR301B-201ENST00000390813 78 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RNU2-5P-201ENST00000410533 180 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC092638.1-201ENST00000411966 1275 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 SNX18P13-201ENST00000412442 529 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 EIF4A1P1-201ENST00000420241 934 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC019178.2-201ENST00000423595 505 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AL593851.1-201ENST00000426171 157 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AF274573.1-201ENST00000430535 494 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 PHBP4-201ENST00000437447 837 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC009237.4-201ENST00000441078 238 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 HMGB3P6-201ENST00000444896 598 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 PABPC1P10-201ENST00000464731 381 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC079594.1-201ENST00000489757 331 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RN7SL306P-201ENST00000492941 296 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RPL5P11-201ENST00000498068 893 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC021087.2-201ENST00000504656 1203 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC008837.1-201ENST00000511513 412 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RNU6-232P-201ENST00000517144 64 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC087360.1-201ENST00000518788 616 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC104417.1-201ENST00000523974 751 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 MTCYBP41-201ENST00000528913 1123 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC126177.6-201ENST00000550420 1009 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC093524.1-201ENST00000564266 1094 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 NDUFA5P11-201ENST00000567995 343 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RN7SL366P-201ENST00000577957 292 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC061975.3-201ENST00000583209 244 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AP004372.1-201ENST00000604842 844 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 RN7SKP299-201ENST00000606679 301 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC143336.1-201ENST00000614164 836 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AC091931.1-201ENST00000623488 728 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AL359740.1-201ENST00000624340 592 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
NUP43Q8NFH3 OR7E161P-202ENST00000641994 1033 ntBASIC6.65□□□□□ -1.34
NUP43Q8NFH3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.65□□□□□ -1.35
NUP43Q8NFH3 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms