Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AL049745.1-201ENST00000433953 286 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC008072.1-201ENST00000434254 824 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC007537.2-201ENST00000472093 511 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 MIR4646-201ENST00000580775 63 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AP002799.1-201ENST00000623552 423 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 CR1-204ENST00000367052 7469 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 CR1-205ENST00000367053 7469 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC009220.1-201ENST00000451614 275 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 RNA5SP319-201ENST00000362768 119 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 SNORA51.8-201ENST00000384234 132 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 RMRPP5-201ENST00000411156 267 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 PDCL3P4-201ENST00000489621 720 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 AC134698.5-201ENST00000519444 336 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 AC006116.3-201ENST00000592968 361 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 MON2-214ENST00000641654 10382 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 AR-208ENST00000612452 10676 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 AC011369.2-201ENST00000624423 1567 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 USP9YP9-201ENST00000429406 715 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 NRBF2P4-201ENST00000520874 850 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 ZBTB39-201ENST00000300101 6170 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 AC009948.3-201ENST00000603415 1798 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 AL359922.2-201ENST00000581788 3017 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS13CQ709C8 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS13CQ709C8 AL391261.1-201ENST00000555712 1479 ntBASIC4.72□□□□□ -1.65
VPS13CQ709C8 AC083982.1-201ENST00000485679 344 ntBASIC4.71□□□□□ -1.65
VPS13CQ709C8 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.71□□□□□ -1.65
VPS13CQ709C8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.71□□□□□ -1.65
VPS13CQ709C8 AC025574.2-201ENST00000615621 514 ntBASIC4.71□□□□□ -1.65
VPS13CQ709C8 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VPS13CQ709C8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS13CQ709C8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VPS13CQ709C8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.71□□□□□ -1.65
VPS13CQ709C8 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS13CQ709C8 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS13CQ709C8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VPS13CQ709C8 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 AC016251.2-201ENST00000623393 3089 ntBASIC4.71□□□□□ -1.66
VPS13CQ709C8 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 AC006213.6-201ENST00000623722 4179 ntBASIC4.71□□□□□ -1.66
VPS13CQ709C8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms