Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 USP48-203ENST00000374732 3037 ntTSL 2 BASIC9.1□□□□□ -0.95
RC3H1Q5TC82 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC068733.1-202ENST00000531479 2456 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 BTF3P7-201ENST00000407097 488 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 CDC42P6-201ENST00000421246 576 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 MTND1P30-201ENST00000441241 901 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 YWHABP1-201ENST00000445359 727 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 OR7A15P-201ENST00000449848 1009 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC093392.2-201ENST00000450682 337 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 NECAP1P2-201ENST00000455668 727 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AL096803.1-201ENST00000456921 1021 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 RN7SL70P-201ENST00000478322 302 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 B3GNTL1P1-201ENST00000509174 289 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 APOBEC3AP1-201ENST00000511396 287 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 BUD31P1-201ENST00000521828 359 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 HIGD1AP10-201ENST00000527837 282 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 MIR212-201ENST00000586026 110 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 MRPS5P4-201ENST00000592830 325 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC044792.1-201ENST00000593294 196 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 MIMT1-201ENST00000597105 1050 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AC018618.2-201ENST00000604770 446 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 DLEU2_1.1-201ENST00000612089 120 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 DLEU2_1.2-201ENST00000614667 120 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 AL591926.1-201ENST00000620542 217 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 MIR6503-201ENST00000622884 86 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 MTCO1P6-201ENST00000481192 1384 ntBASIC9.09□□□□□ -0.95
RC3H1Q5TC82 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
RC3H1Q5TC82 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.96
RC3H1Q5TC82 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC124045.1-201ENST00000606008 1953 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 SGO1P2-201ENST00000429458 1589 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 RN7SKP189-201ENST00000365042 330 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 ATP5F1P4-201ENST00000397288 746 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 RSL24D1P4-201ENST00000400938 484 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 RNA5SP155-201ENST00000411154 129 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 RPS27AP7-201ENST00000422792 455 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 VN1R42P-201ENST00000424651 344 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms