Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC110056.1-201ENST00000525759 911 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGCS2P54868 AC010547.6-201ENST00000571789 193 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGCS2P54868 FAM27E4-201ENST00000605259 342 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HMGCS2P54868 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGCS2P54868 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HMGCS2P54868 CR788268.1-201ENST00000603931 1809 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGCS2P54868 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGCS2P54868 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGCS2P54868 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGCS2P54868 MAPK10-365ENST00000641902 3825 ntBASIC7.03□□□□□ -1.28
HMGCS2P54868 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGCS2P54868 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
HMGCS2P54868 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
HMGCS2P54868 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGCS2P54868 AL161901.1-201ENST00000624954 3425 ntBASIC7.02□□□□□ -1.28
HMGCS2P54868 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
HMGCS2P54868 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
HMGCS2P54868 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 AC092111.1-201ENST00000618256 3358 ntBASIC7.02□□□□□ -1.29
HMGCS2P54868 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGCS2P54868 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
HMGCS2P54868 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HMGCS2P54868 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
HMGCS2P54868 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 RN7SKP77-201ENST00000363261 353 ntBASIC7.02□□□□□ -1.29
HMGCS2P54868 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HMGCS2P54868 AC023245.1-201ENST00000468501 517 ntBASIC7.02□□□□□ -1.29
HMGCS2P54868 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 OR56A7P-201ENST00000524865 941 ntBASIC7.02□□□□□ -1.29
HMGCS2P54868 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGCS2P54868 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGCS2P54868 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGCS2P54868 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGCS2P54868 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGCS2P54868 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGCS2P54868 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.02□□□□□ -1.29
HMGCS2P54868 AC013244.1-201ENST00000604279 193 ntBASIC7.02□□□□□ -1.29
HMGCS2P54868 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGCS2P54868 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGCS2P54868 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGCS2P54868 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 CTAGE11P-201ENST00000451540 2353 ntBASIC7.02□□□□□ -1.29
HMGCS2P54868 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
HMGCS2P54868 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGCS2P54868 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HMGCS2P54868 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 HDAC1P2-201ENST00000453661 1398 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HMGCS2P54868 SELENOWP1-201ENST00000322792 252 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGCS2P54868 RN7SKP128-201ENST00000364270 303 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HMGCS2P54868 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 MIR1178-201ENST00000408396 91 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGCS2P54868 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGCS2P54868 KIF4CP-201ENST00000422742 1279 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGCS2P54868 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC083795.1-201ENST00000491760 320 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 RN7SL57P-201ENST00000493687 290 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGCS2P54868 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.01□□□□□ -1.29
HMGCS2P54868 AC015802.2-201ENST00000589690 189 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.01□□□□□ -1.29
HMGCS2P54868 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HMGCS2P54868 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms