Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.39□□□□□ -1.23
NUP98P52948 AC008957.3-201ENST00000624112 2242 ntBASIC7.39□□□□□ -1.23
NUP98P52948 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
NUP98P52948 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.39□□□□□ -1.23
NUP98P52948 U3.7-201ENST00000363668 216 ntBASIC7.39□□□□□ -1.23
NUP98P52948 SNORA58B-201ENST00000364259 136 ntBASIC7.39□□□□□ -1.23
NUP98P52948 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.39□□□□□ -1.23
NUP98P52948 GABARAPL3-201ENST00000412799 354 ntBASIC7.39□□□□□ -1.23
NUP98P52948 ATP5LP3-201ENST00000514223 304 ntBASIC7.39□□□□□ -1.23
NUP98P52948 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NUP98P52948 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.39□□□□□ -1.23
NUP98P52948 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.39□□□□□ -1.23
NUP98P52948 SUMO2P15-201ENST00000604285 278 ntBASIC7.39□□□□□ -1.23
NUP98P52948 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.39□□□□□ -1.23
NUP98P52948 AC008937.3-201ENST00000606813 1700 ntBASIC7.39□□□□□ -1.23
NUP98P52948 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.39□□□□□ -1.23
NUP98P52948 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NUP98P52948 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NUP98P52948 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NUP98P52948 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NUP98P52948 AL359922.2-201ENST00000581788 3017 ntBASIC7.39□□□□□ -1.23
NUP98P52948 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.39□□□□□ -1.23
NUP98P52948 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NUP98P52948 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NUP98P52948 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NUP98P52948 AC006058.1-201ENST00000568686 5067 ntBASIC7.39□□□□□ -1.23
NUP98P52948 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NUP98P52948 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
NUP98P52948 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.38□□□□□ -1.23
NUP98P52948 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.38□□□□□ -1.23
NUP98P52948 OR5W1P-201ENST00000423705 938 ntBASIC7.38□□□□□ -1.23
NUP98P52948 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.38□□□□□ -1.23
NUP98P52948 AL162739.1-201ENST00000450606 307 ntBASIC7.38□□□□□ -1.23
NUP98P52948 LRRC37A14P-201ENST00000452297 462 ntBASIC7.38□□□□□ -1.23
NUP98P52948 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.38□□□□□ -1.23
NUP98P52948 EIF3LP3-201ENST00000495197 822 ntBASIC7.38□□□□□ -1.23
NUP98P52948 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.38□□□□□ -1.23
NUP98P52948 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.38□□□□□ -1.23
NUP98P52948 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
NUP98P52948 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.38□□□□□ -1.23
NUP98P52948 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 LINC02019-201ENST00000608605 2060 ntBASIC7.38□□□□□ -1.23
NUP98P52948 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.38□□□□□ -1.23
NUP98P52948 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.38□□□□□ -1.23
NUP98P52948 MIR105-2-201ENST00000385083 81 ntBASIC7.38□□□□□ -1.23
NUP98P52948 AC016769.2-201ENST00000414815 475 ntBASIC7.38□□□□□ -1.23
NUP98P52948 BRWD1P3-201ENST00000428816 390 ntBASIC7.38□□□□□ -1.23
NUP98P52948 YWHAEP1-201ENST00000453697 763 ntBASIC7.38□□□□□ -1.23
NUP98P52948 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
NUP98P52948 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.38□□□□□ -1.23
NUP98P52948 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.38□□□□□ -1.23
NUP98P52948 GARSP1-201ENST00000570895 719 ntBASIC7.38□□□□□ -1.23
NUP98P52948 AC004890.3-201ENST00000605566 1095 ntBASIC7.38□□□□□ -1.23
NUP98P52948 USP9YP3-201ENST00000434481 1766 ntBASIC7.38□□□□□ -1.23
NUP98P52948 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC7.38□□□□□ -1.23
NUP98P52948 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
NUP98P52948 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NUP98P52948 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NUP98P52948 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.37□□□□□ -1.23
NUP98P52948 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.37□□□□□ -1.23
NUP98P52948 AC123769.1-201ENST00000530992 3192 ntBASIC7.37□□□□□ -1.23
NUP98P52948 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.37□□□□□ -1.23
NUP98P52948 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 LINC01963-201ENST00000562038 3148 ntBASIC7.37□□□□□ -1.23
NUP98P52948 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.37□□□□□ -1.23
NUP98P52948 AC012075.1-201ENST00000436549 580 ntBASIC7.37□□□□□ -1.23
NUP98P52948 CYCSP51-201ENST00000443545 318 ntBASIC7.37□□□□□ -1.23
NUP98P52948 RAB28P2-201ENST00000454299 641 ntBASIC7.37□□□□□ -1.23
NUP98P52948 PFN1P6-201ENST00000476786 399 ntBASIC7.37□□□□□ -1.23
NUP98P52948 RPL23AP40-201ENST00000487630 390 ntBASIC7.37□□□□□ -1.23
NUP98P52948 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.37□□□□□ -1.23
NUP98P52948 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.37□□□□□ -1.23
NUP98P52948 AP001496.3-201ENST00000580230 913 ntBASIC7.37□□□□□ -1.23
NUP98P52948 AC067852.5-201ENST00000589299 310 ntBASIC7.37□□□□□ -1.23
NUP98P52948 AC069234.4-201ENST00000621276 412 ntBASIC7.37□□□□□ -1.23
NUP98P52948 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 AC109780.1-201ENST00000451768 1344 ntBASIC7.37□□□□□ -1.23
NUP98P52948 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NUP98P52948 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 RNA5SP131-201ENST00000365452 119 ntBASIC7.36□□□□□ -1.23
NUP98P52948 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.36□□□□□ -1.23
NUP98P52948 MRPL53P1-201ENST00000414323 319 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms