Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.53□□□□□ -1.36
RXRGP48443 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 RNA5SP514-201ENST00000363717 111 ntBASIC6.53□□□□□ -1.36
RXRGP48443 RNA5SP279-201ENST00000365513 117 ntBASIC6.53□□□□□ -1.36
RXRGP48443 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RXRGP48443 RPL9P21-201ENST00000392269 505 ntBASIC6.53□□□□□ -1.36
RXRGP48443 DHFRP5-201ENST00000406944 564 ntBASIC6.53□□□□□ -1.36
RXRGP48443 RNA5SP431-201ENST00000410312 120 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AC096537.2-201ENST00000413707 714 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 NME1P1-201ENST00000420914 382 ntBASIC6.53□□□□□ -1.36
RXRGP48443 RPS7P12-201ENST00000422385 582 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 GAPDHP59-201ENST00000435908 267 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 RN7SL39P-201ENST00000462264 297 ntBASIC6.53□□□□□ -1.36
RXRGP48443 RN7SL382P-201ENST00000482631 282 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.53□□□□□ -1.36
RXRGP48443 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 AL078601.3-201ENST00000573303 535 ntBASIC6.53□□□□□ -1.36
RXRGP48443 SNORD39.2-201ENST00000579995 76 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AC026898.1-201ENST00000586404 571 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AC245128.3-201ENST00000594721 748 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AC079315.1-201ENST00000602952 623 ntBASIC6.53□□□□□ -1.36
RXRGP48443 SMIM12P1-201ENST00000603004 274 ntBASIC6.53□□□□□ -1.36
RXRGP48443 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.53□□□□□ -1.36
RXRGP48443 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.53□□□□□ -1.36
RXRGP48443 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 AP005139.1-201ENST00000580702 1647 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AC027575.3-201ENST00000583058 2747 ntBASIC6.53□□□□□ -1.36
RXRGP48443 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.52□□□□□ -1.36
RXRGP48443 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 AC010401.2-201ENST00000575137 4934 ntBASIC6.52□□□□□ -1.37
RXRGP48443 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.52□□□□□ -1.37
RXRGP48443 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 IMMTP1-201ENST00000435590 2219 ntBASIC6.52□□□□□ -1.37
RXRGP48443 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.52□□□□□ -1.37
RXRGP48443 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.52□□□□□ -1.37
RXRGP48443 RNA5SP77-201ENST00000365394 120 ntBASIC6.52□□□□□ -1.37
RXRGP48443 RNU1-84P-201ENST00000365447 164 ntBASIC6.52□□□□□ -1.37
RXRGP48443 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RXRGP48443 RN7SKP296-201ENST00000411185 341 ntBASIC6.52□□□□□ -1.37
RXRGP48443 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRGP48443 PSMD10P2-201ENST00000432890 672 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRGP48443 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRGP48443 BUD31P2-201ENST00000449374 300 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AC104629.2-201ENST00000468627 598 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.52□□□□□ -1.37
RXRGP48443 AC105918.1-201ENST00000474399 838 ntBASIC6.52□□□□□ -1.37
RXRGP48443 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.52□□□□□ -1.37
RXRGP48443 OR4V1P-201ENST00000525394 1140 ntBASIC6.52□□□□□ -1.37
RXRGP48443 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.52□□□□□ -1.37
RXRGP48443 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.52□□□□□ -1.37
RXRGP48443 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.52□□□□□ -1.37
RXRGP48443 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.52□□□□□ -1.37
RXRGP48443 AP003115.1-201ENST00000569849 463 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.52□□□□□ -1.37
RXRGP48443 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.52□□□□□ -1.37
RXRGP48443 AC067852.5-201ENST00000589299 310 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AL159169.2-201ENST00000610061 1269 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AF117829.2-201ENST00000619538 361 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AC015660.5-201ENST00000623238 564 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AC018659.2-201ENST00000624690 715 ntBASIC6.52□□□□□ -1.37
RXRGP48443 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.52□□□□□ -1.37
RXRGP48443 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms