Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
POLR2AP24928 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
POLR2AP24928 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.12□□□□□ -1.27
POLR2AP24928 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
POLR2AP24928 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
POLR2AP24928 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
POLR2AP24928 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
POLR2AP24928 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.12□□□□□ -1.27
POLR2AP24928 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
POLR2AP24928 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 RN7SKP115-201ENST00000363177 317 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 OR2W4P-201ENST00000406496 926 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 AP000534.2-201ENST00000412729 568 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.11□□□□□ -1.27
POLR2AP24928 CUBNP2-201ENST00000443534 1139 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 AC091685.2-201ENST00000454924 864 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.11□□□□□ -1.27
POLR2AP24928 RN7SKP288-201ENST00000516227 268 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC7.11□□□□□ -1.27
POLR2AP24928 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.11□□□□□ -1.27
POLR2AP24928 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 DNAJC19P3-201ENST00000594491 331 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 AL121612.2-201ENST00000612261 482 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 AC005840.5-201ENST00000619166 599 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 OR5AQ1P-202ENST00000641257 1534 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 OR5AQ1P-203ENST00000641818 1529 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 AC110373.1-201ENST00000505994 3505 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 AC005831.1-201ENST00000624384 1697 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.11□□□□□ -1.27
POLR2AP24928 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.11□□□□□ -1.27
POLR2AP24928 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
POLR2AP24928 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 RN7SKP29-201ENST00000410957 272 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.11□□□□□ -1.27
POLR2AP24928 RPS27P18-201ENST00000431701 247 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 RN7SL72P-201ENST00000460697 269 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.11□□□□□ -1.27
POLR2AP24928 CBX1P5-201ENST00000475330 559 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 RN7SL547P-201ENST00000490793 290 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
POLR2AP24928 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
POLR2AP24928 AC011458.1-201ENST00000604034 617 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 AC116651.1-201ENST00000609724 556 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 AC023510.2-201ENST00000622162 746 ntBASIC7.11□□□□□ -1.27
POLR2AP24928 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.11□□□□□ -1.27
POLR2AP24928 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
POLR2AP24928 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
POLR2AP24928 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.1□□□□□ -1.27
POLR2AP24928 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.1□□□□□ -1.27
POLR2AP24928 AL161756.3-201ENST00000641216 2071 ntBASIC7.1□□□□□ -1.27
POLR2AP24928 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
POLR2AP24928 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
POLR2AP24928 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC7.1□□□□□ -1.27
POLR2AP24928 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.1□□□□□ -1.27
POLR2AP24928 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.1□□□□□ -1.27
POLR2AP24928 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
POLR2AP24928 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 SNRPEP6-201ENST00000407465 277 ntBASIC7.1□□□□□ -1.27
POLR2AP24928 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.1□□□□□ -1.27
POLR2AP24928 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.1□□□□□ -1.27
POLR2AP24928 AC018635.1-201ENST00000468292 1030 ntBASIC7.1□□□□□ -1.27
POLR2AP24928 BX284632.1-201ENST00000478218 541 ntBASIC7.1□□□□□ -1.27
POLR2AP24928 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.1□□□□□ -1.27
POLR2AP24928 AP000662.1-201ENST00000530952 487 ntBASIC7.1□□□□□ -1.27
POLR2AP24928 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.1□□□□□ -1.27
POLR2AP24928 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.1□□□□□ -1.27
POLR2AP24928 AC016542.2-201ENST00000624201 619 ntBASIC7.1□□□□□ -1.27
POLR2AP24928 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.1□□□□□ -1.27
POLR2AP24928 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.1□□□□□ -1.27
POLR2AP24928 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
POLR2AP24928 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms