Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 AC073365.1-203ENST00000641055 1992 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.52□□□□□ -1.53
FREM3P0C091 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.52□□□□□ -1.53
FREM3P0C091 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 SNORA21-201ENST00000362423 132 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.52□□□□□ -1.53
FREM3P0C091 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
FREM3P0C091 TMA16P2-201ENST00000413187 601 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.52□□□□□ -1.53
FREM3P0C091 BX284632.2-201ENST00000421091 399 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.52□□□□□ -1.53
FREM3P0C091 AL512605.1-202ENST00000441919 381 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 AC073109.1-201ENST00000445066 978 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 AL359955.2-201ENST00000445380 353 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.52□□□□□ -1.53
FREM3P0C091 UBFD1P1-201ENST00000473259 814 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.52□□□□□ -1.53
FREM3P0C091 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.52□□□□□ -1.53
FREM3P0C091 AC006512.2-201ENST00000543250 486 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 AC073916.1-201ENST00000545095 130 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 RPA2P1-201ENST00000556557 721 ntBASIC5.52□□□□□ -1.53
FREM3P0C091 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.52□□□□□ -1.53
FREM3P0C091 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.52□□□□□ -1.53
FREM3P0C091 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.52□□□□□ -1.53
FREM3P0C091 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.52□□□□□ -1.53
FREM3P0C091 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.52□□□□□ -1.53
FREM3P0C091 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
FREM3P0C091 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
FREM3P0C091 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
FREM3P0C091 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC5.52□□□□□ -1.53
FREM3P0C091 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
FREM3P0C091 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
FREM3P0C091 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 RNA5SP122-201ENST00000384457 108 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.51□□□□□ -1.53
FREM3P0C091 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.51□□□□□ -1.53
FREM3P0C091 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.51□□□□□ -1.53
FREM3P0C091 AL355032.1-201ENST00000472981 438 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 AC008945.1-201ENST00000505144 499 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.51□□□□□ -1.53
FREM3P0C091 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.51□□□□□ -1.53
FREM3P0C091 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.51□□□□□ -1.53
FREM3P0C091 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
FREM3P0C091 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.51□□□□□ -1.53
FREM3P0C091 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
FREM3P0C091 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
FREM3P0C091 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 RNA5SP433-201ENST00000364491 114 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.51□□□□□ -1.53
FREM3P0C091 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.51□□□□□ -1.53
FREM3P0C091 RPS3P2-201ENST00000421346 701 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 PDZK1P1-202ENST00000425209 1350 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 AL157777.1-201ENST00000468100 304 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.51□□□□□ -1.53
FREM3P0C091 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.51□□□□□ -1.53
FREM3P0C091 AC110056.1-201ENST00000525759 911 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 AC092121.1-201ENST00000569452 202 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.51□□□□□ -1.53
FREM3P0C091 AC108865.2-201ENST00000606881 432 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 AC092681.3-201ENST00000609463 678 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
FREM3P0C091 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.51□□□□□ -1.53
FREM3P0C091 AL355480.1-201ENST00000629041 99 ntBASIC5.51□□□□□ -1.53
FREM3P0C091 CASC19-238ENST00000641523 1558 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms