Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPK1AO00322 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.77□□□□□ -1.49
UPK1AO00322 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPK1AO00322 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPK1AO00322 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPK1AO00322 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPK1AO00322 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
UPK1AO00322 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.77□□□□□ -1.49
UPK1AO00322 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.77□□□□□ -1.49
UPK1AO00322 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.77□□□□□ -1.49
UPK1AO00322 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
UPK1AO00322 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.77□□□□□ -1.49
UPK1AO00322 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UPK1AO00322 AC011416.1-201ENST00000514947 1732 ntBASIC5.77□□□□□ -1.49
UPK1AO00322 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
UPK1AO00322 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.76□□□□□ -1.49
UPK1AO00322 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 AC024651.2-201ENST00000562480 2098 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 AC024587.1-201ENST00000505925 2157 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 AC018717.1-201ENST00000457712 1505 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
UPK1AO00322 U3.10-201ENST00000364459 214 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 SNORA77.2-201ENST00000408571 112 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 RN7SKP17-201ENST00000411242 351 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 RN7SL552P-201ENST00000462094 276 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.76□□□□□ -1.49
UPK1AO00322 ZNF519P4-201ENST00000514008 125 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 BTG1P1-201ENST00000540396 508 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 RNU4ATAC-201ENST00000580972 127 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 AC008555.7-201ENST00000605008 583 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.76□□□□□ -1.49
UPK1AO00322 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 AC097634.1-201ENST00000604491 2467 ntBASIC5.76□□□□□ -1.49
UPK1AO00322 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.76□□□□□ -1.49
UPK1AO00322 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UPK1AO00322 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.76□□□□□ -1.49
UPK1AO00322 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
UPK1AO00322 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.76□□□□□ -1.49
UPK1AO00322 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
UPK1AO00322 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 EIF3EP1-201ENST00000433978 1316 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.75□□□□□ -1.49
UPK1AO00322 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.75□□□□□ -1.49
UPK1AO00322 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
UPK1AO00322 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.75□□□□□ -1.49
UPK1AO00322 RN7SKP144-201ENST00000411108 279 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.75□□□□□ -1.49
UPK1AO00322 AL590004.3-202ENST00000445883 451 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 RPL29P23-201ENST00000486188 442 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.75□□□□□ -1.49
UPK1AO00322 SNX18P25-201ENST00000510539 758 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 AC090958.1-201ENST00000511122 351 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.75□□□□□ -1.49
UPK1AO00322 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.75□□□□□ -1.49
UPK1AO00322 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.75□□□□□ -1.49
UPK1AO00322 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 AP001823.1-201ENST00000604056 1003 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.75□□□□□ -1.49
UPK1AO00322 AL109924.4-201ENST00000623089 670 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 MAPK10-350ENST00000641777 965 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms