Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AC063977.7-201ENST00000594454 337 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AL591222.2-201ENST00000604443 754 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AL512413.1-201ENST00000606489 382 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 MIR6885-201ENST00000612241 66 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 MIR6883-201ENST00000614952 78 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AC069234.4-201ENST00000621276 412 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 CLUHP10-201ENST00000631979 980 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AL359091.1-201ENST00000449048 1734 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 EIF3EP1-201ENST00000433978 1316 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 OR51C1P-202ENST00000641159 1444 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 OR5M2P-202ENST00000641241 4242 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 CASC19-246ENST00000641625 1606 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 RN7SKP257-201ENST00000364525 309 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 NDUFA5P1-201ENST00000433858 341 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 PSMD8P1-201ENST00000436275 769 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 MTND4P15-201ENST00000437913 1033 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 CXCR2P1-202ENST00000443392 1074 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AL512593.1-201ENST00000444758 779 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 PPIAP32-201ENST00000449940 472 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 OR6C72P-201ENST00000451403 892 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC025283.1-201ENST00000572039 734 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 RN7SL261P-201ENST00000613441 282 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 GAPDHP41-201ENST00000613707 975 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC009032.1-201ENST00000617574 431 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC211486.4-201ENST00000621495 113 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 MTND4P21-201ENST00000453886 1357 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 AC114876.1-201ENST00000490962 1366 ntBASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TCRBV7S3A2A0A539 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 RPL11P4-201ENST00000332269 436 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 RNA5SP375-201ENST00000362975 119 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 SNORD94-201ENST00000386037 137 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 SNORA77.2-201ENST00000408571 112 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 RNU6-564P-201ENST00000410983 104 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 AC017035.1-201ENST00000411999 1115 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 PTCD2P2-201ENST00000415579 1095 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 GPN3P1-201ENST00000423883 535 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 AL590623.1-201ENST00000427864 105 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 USP24P1-201ENST00000433802 779 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 AC094019.1-201ENST00000434678 472 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 AL022324.2-201ENST00000434827 780 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 MAPRE1P3-201ENST00000435438 796 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 AP000949.1-201ENST00000438328 629 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 AL031681.1-201ENST00000443304 400 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 AC092601.1-201ENST00000444526 383 ntBASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.25□□□□□ -1.41
TCRBV7S3A2A0A539 RPS7P11-201ENST00000484240 586 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms