Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC187A0A096LP49 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC187A0A096LP49 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC187A0A096LP49 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC187A0A096LP49 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC187A0A096LP49 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC187A0A096LP49 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC187A0A096LP49 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC187A0A096LP49 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.21□□□□□ -1.41
CCDC187A0A096LP49 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.21□□□□□ -1.41
CCDC187A0A096LP49 AC087565.3-202ENST00000642085 1603 ntBASIC6.21□□□□□ -1.41
CCDC187A0A096LP49 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.41
CCDC187A0A096LP49 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC187A0A096LP49 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.21□□□□□ -1.41
CCDC187A0A096LP49 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.21□□□□□ -1.41
CCDC187A0A096LP49 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.21□□□□□ -1.41
CCDC187A0A096LP49 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 RNU6-316P-201ENST00000391027 107 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 DHFRP2-201ENST00000414224 547 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 DUTP4-201ENST00000424782 475 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 RPL6P30-201ENST00000443382 862 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 HMGN1P15-201ENST00000513870 295 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC027338.1-201ENST00000514840 825 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC074029.2-201ENST00000551045 634 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AL591767.3-201ENST00000554632 525 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 NPM1P5-201ENST00000557228 838 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC090826.1-203ENST00000569235 490 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC027281.1-201ENST00000574178 758 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 SNORA70D-201ENST00000578836 135 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC013731.1-201ENST00000604340 883 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC108865.2-201ENST00000606881 432 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AL445649.1-201ENST00000615941 691 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC074276.2-201ENST00000619891 348 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC026124.2-201ENST00000621847 656 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AC063952.1-203ENST00000634410 658 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AL133243.4-201ENST00000623116 3109 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 ZNF658B-201ENST00000602828 3408 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 ZNF101P1-201ENST00000435701 1720 ntBASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC187A0A096LP49 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 ICE2P1-201ENST00000512800 1849 ntBASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 TATDN2P3-201ENST00000452855 3665 ntBASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 AC005839.1-201ENST00000624148 3213 ntBASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 AC007406.5-201ENST00000570140 3170 ntBASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 RN7SKP78-201ENST00000364711 318 ntBASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 AL353625.1-202ENST00000366273 571 ntBASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 MIR1204-201ENST00000408388 67 ntBASIC6.2□□□□□ -1.42
CCDC187A0A096LP49 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms