Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 KRT8P36-201ENST00000489121 1440 ntBASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPIPA1Q9UND3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 AP001412.1-201ENST00000608405 714 ntBASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NPIPA1Q9UND3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 REXO1L12P-201ENST00000622156 912 ntBASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 AL049637.2-201ENST00000641778 930 ntBASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 AL135905.2-201ENST00000584934 1404 ntBASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 KRT17P2-201ENST00000300992 1314 ntBASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NPIPA1Q9UND3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 AC073130.3-201ENST00000624389 2278 ntBASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 ECEL1P3-201ENST00000427961 737 ntBASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 AC138932.1-201ENST00000534164 6830 ntBASIC18.2■□□□□ 0.5
NPIPA1Q9UND3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 AC023632.3-201ENST00000521633 145 ntBASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPIPA1Q9UND3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms