Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 AF186192.3-201ENST00000583427 947 ntBASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 AC113410.3-201ENST00000623366 203 ntBASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 KRT18P16-201ENST00000510337 1294 ntBASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 AL157384.1-201ENST00000445995 2473 ntBASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBQLN1Q9UMX0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 AL691432.2-201ENST00000607222 2038 ntBASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 AL353708.3-201ENST00000610272 989 ntBASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBQLN1Q9UMX0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
UBQLN1Q9UMX0 AL391422.3-201ENST00000603791 2761 ntBASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 AC099778.1-201ENST00000568593 1911 ntBASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 TUBB8P6-201ENST00000436895 1288 ntBASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 AP002982.1-201ENST00000492365 877 ntBASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
UBQLN1Q9UMX0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UBQLN1Q9UMX0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms