Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 AC006058.3-201ENST00000606217 1069 ntBASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CUEDC1Q9NWM3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CUEDC1Q9NWM3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 AC128676.1-201ENST00000454392 318 ntBASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 PHGDH-210ENST00000641115 1638 ntBASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.1■□□□□ 0.65
CUEDC1Q9NWM3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 AC233263.1-201ENST00000578059 224 ntBASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.09■□□□□ 0.65
CUEDC1Q9NWM3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.08■□□□□ 0.65
CUEDC1Q9NWM3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CUEDC1Q9NWM3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CUEDC1Q9NWM3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CUEDC1Q9NWM3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CUEDC1Q9NWM3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CUEDC1Q9NWM3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 POM121L13P-201ENST00000422362 380 ntBASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CUEDC1Q9NWM3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms